U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

UBR4 ubiquitin protein ligase E3 component n-recognin 4 [ Gallus gallus (chicken) ]

Gene ID: 419469, updated on 3-Dec-2024

Summary

Go to the top of the page Help
Symbol
UBR4provided by CGNC
Full Name
ubiquitin protein ligase E3 component n-recognin 4provided by CGNC
Primary source
CGNC:51004
See related
Ensembl:ENSGALG00010020517
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
ZUBR1
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See UBR4 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
107
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 21 NC_052552.1 (4585911..4653694, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 21 NC_052593.1 (4619203..4686840, complement)

Chromosome 21 - NC_052552.1Genomic Context describing neighboring genes Neighboring gene aldehyde dehydrogenase 4 family member A1 Neighboring gene intermediate filament family orphan 2 Neighboring gene uncharacterized LOC121107388 Neighboring gene microRNA 6626 Neighboring gene ER membrane protein complex subunit 1 Neighboring gene MRT4 homolog, ribosome maturation factor

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
E3 ubiquitin-protein ligase UBR4
Names
zinc finger, UBR1 type 1
XP_040507305.1
XP_040507306.1
XP_040507307.1
XP_040507308.1
XP_040507309.1
XP_046787351.1
XP_046787352.1
XP_046787353.1
XP_046787354.1
XP_046787355.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052552.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    4585911..4653694 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040651375.1 → XP_040507309.1  E3 ubiquitin-protein ligase UBR4 isoform X5

    UniProtKB/TrEMBL
    A0A8V0Z7S9
    Conserved Domains (1) summary
    smart00396
    Location:1679 → 1746
    ZnF_UBR1; Putative zinc finger in N-recognin, a recognition component of the N-end rule pathway

  2. XM_040651374.1 → XP_040507308.1  E3 ubiquitin-protein ligase UBR4 isoform X4

    UniProtKB/TrEMBL
    A0A8V0Z7S9
    Related
    ENSGALP00010029299.1, ENSGALT00010049596.1
    Conserved Domains (1) summary
    smart00396
    Location:1679 → 1746
    ZnF_UBR1; Putative zinc finger in N-recognin, a recognition component of the N-end rule pathway

  3. XM_040651373.1 → XP_040507307.1  E3 ubiquitin-protein ligase UBR4 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZKZ2
    Conserved Domains (1) summary
    smart00396
    Location:1679 → 1746
    ZnF_UBR1; Putative zinc finger in N-recognin, a recognition component of the N-end rule pathway

  4. XM_040651372.1 → XP_040507306.1  E3 ubiquitin-protein ligase UBR4 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZKZ2
    Conserved Domains (1) summary
    smart00396
    Location:1679 → 1746
    ZnF_UBR1; Putative zinc finger in N-recognin, a recognition component of the N-end rule pathway

  5. XM_040651371.1 → XP_040507305.1  E3 ubiquitin-protein ligase UBR4 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZKZ2
    Related
    ENSGALP00010029290.1, ENSGALT00010049581.1
    Conserved Domains (1) summary
    smart00396
    Location:1679 → 1746
    ZnF_UBR1; Putative zinc finger in N-recognin, a recognition component of the N-end rule pathway

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052593.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    4619203..4686840 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046931399.1 → XP_046787355.1  E3 ubiquitin-protein ligase UBR4 isoform X10

    UniProtKB/TrEMBL
    A0A8V0Z7S9

  2. XM_046931398.1 → XP_046787354.1  E3 ubiquitin-protein ligase UBR4 isoform X9

    UniProtKB/TrEMBL
    A0A8V0Z7S9

  3. XM_046931397.1 → XP_046787353.1  E3 ubiquitin-protein ligase UBR4 isoform X8

    UniProtKB/TrEMBL
    A0A8V0ZKZ2

  4. XM_046931396.1 → XP_046787352.1  E3 ubiquitin-protein ligase UBR4 isoform X7

    UniProtKB/TrEMBL
    A0A8V0ZKZ2

  5. XM_046931395.1 → XP_046787351.1  E3 ubiquitin-protein ligase UBR4 isoform X6

    UniProtKB/TrEMBL
    A0A8V0ZKZ2
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials