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ARHGAP25 Rho GTPase activating protein 25 [ Gallus gallus (chicken) ]

Gene ID: 419516, updated on 3-Dec-2024

Summary

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Official Symbol
ARHGAP25provided by CGNC
Official Full Name
Rho GTPase activating protein 25provided by CGNC
Primary source
CGNC:66
See related
Ensembl:ENSGALG00010020323
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See ARHGAP25 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
12
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 22 NC_052553.1 (346723..363476, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 22 NC_052594.1 (360147..376900, complement)

Chromosome 22 - NC_052553.1Genomic Context describing neighboring genes Neighboring gene gastrokine 3 Neighboring gene gastrokine 2 Neighboring gene bone morphogenetic protein 10 Neighboring gene uncharacterized LOC107054953 Neighboring gene CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2 Neighboring gene proliferating cell nuclear antigen

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in activation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of small GTPase mediated signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phagocytosis, engulfment IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in phagocytic cup IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rho GTPase-activating protein 25

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001030883.2 → NP_001026054.2  rho GTPase-activating protein 25

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000331
    UniProtKB/TrEMBL
    A0A1D5PK72, Q5ZJ53
    Related
    ENSGALP00010029018.1, ENSGALT00010049075.1

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052553.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    346723..363476 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015297303.4 → XP_015152789.1  rho GTPase-activating protein 25 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZDT5
    Related
    ENSGALP00010029012.1, ENSGALT00010049068.1
    Conserved Domains (4) summary
    cd04390
    Location:129 → 327
    RhoGAP_ARHGAP22_24_25; RhoGAP_ARHGAP22_24_25: GTPase-activator protein (GAP) domain for Rho-like GTPases found in ARHGAP22, 24 and 25-like proteins; longer isoforms of these proteins contain an additional N-terminal pleckstrin homology (PH) domain. ARHGAP25 (KIA0053) has been ...
    cd13263
    Location:17 → 130
    PH_RhoGap25-like; Rho GTPase activating protein 25 and related proteins Pleckstrin homology (PH) domain
    pfam00169
    Location:19 → 123
    PH; PH domain
    cl23720
    Location:547 → 633
    RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)

  2. XM_046903356.1 → XP_046759312.1  rho GTPase-activating protein 25 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZDT5

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052594.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    360147..376900 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046931604.1 → XP_046787560.1  rho GTPase-activating protein 25 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZDT5

  2. XM_046931603.1 → XP_046787559.1  rho GTPase-activating protein 25 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZDT5
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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