PPT1 palmitoyl-protein thioesterase 1 [Gallus gallus (chicken)] - Gene

Summary

Symbol: PPT1provided by CGNC
Full Name: palmitoyl-protein thioesterase 1provided by CGNC
Primary source: CGNC:2887
See related: Ensembl:ENSGALG00010015109
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Annotation information: Annotation category: suggests misassembly
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 23

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	23	NC_052554.1 (5924270..5928925, complement)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	23	NC_052595.1 (5687555..5692216, complement)

Chromosome 23 - NC_052554.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables palmitoyl-(protein) hydrolase activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in protein depalmitoylation	IEA Inferred from Electronic Annotation more info	PubMed
involved_in receptor-mediated endocytosis	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in lysosome	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: palmitoyl-protein thioesterase 1

Names: palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile)

NP_001026074.1

EC 3.1.2.22

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001030903.1 → NP_001026074.1 palmitoyl-protein thioesterase 1 precursor

See identical proteins and their annotated locations for NP_001026074.1

Status: PROVISIONAL

Source sequence(s)

AJ720351

UniProtKB/TrEMBL

A0A8V0YR47, Q5ZJT3

Related

ENSGALP00010021169.1, ENSGALT00010036385.1

Conserved Domains (1) summary

cl21494
Location:27 → 302

Abhydrolase; alpha/beta hydrolases

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

NC_052554.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Range

5924270..5928925 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)