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IFI35 interferon-induced protein 35 [ Gallus gallus (chicken) ]

Gene ID: 420011, updated on 17-Aug-2024

Summary

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Official Symbol
IFI35provided by CGNC
Official Full Name
interferon-induced protein 35provided by CGNC
Primary source
CGNC:2041
See related
Ensembl:ENSGALG00010022439
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See IFI35 in Genome Data Viewer
Location:
chromosome: 27
Exon count:
9
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 27 NC_052558.1 (5100555..5103759)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 27 NC_052599.1 (6262572..6265776)

Chromosome 27 - NC_052558.1Genomic Context describing neighboring genes Neighboring gene RUN domain containing 1 Neighboring gene ribosomal protein L27 Neighboring gene uncharacterized LOC121106446 Neighboring gene vesicle amine transport 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
interferon-induced 35 kDa protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052558.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    5100555..5103759
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_418132.8 → XP_418132.1  interferon-induced 35 kDa protein

    UniProtKB/TrEMBL
    A0A8V0ZNC1
    Related
    ENSGALP00010032954.1, ENSGALT00010054548.1
    Conserved Domains (3) summary
    cd12545
    Location:227 → 306
    RRM_IN35; RNA recognition motif in interferon-induced 35 kDa protein (IFP 35) and similar proteins
    pfam07292
    Location:275 → 361
    NID; Nmi/IFP 35 domain (NID)
    pfam13863
    Location:15 → 117
    DUF4200; Domain of unknown function (DUF4200)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052599.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    6262572..6265776
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040692408.2 → XP_040548342.1  interferon-induced 35 kDa protein

    UniProtKB/TrEMBL
    A0A2R3TVM2
    Conserved Domains (3) summary
    COG1196
    Location:15 → 123
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam07292
    Location:275 → 361
    NID; Nmi/IFP 35 domain (NID)
    cd12545
    Location:227 → 306
    RRM_IN35; RNA recognition motif in interferon-induced 35 kDa protein (IFP 35) and similar proteins
Nucleotide Protein Strain
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