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UHRF1 ubiquitin like with PHD and ring finger domains 1 [ Gallus gallus (chicken) ]

Gene ID: 420154, updated on 3-Dec-2024

Summary

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Symbol
UHRF1provided by CGNC
Full Name
ubiquitin like with PHD and ring finger domains 1provided by CGNC
Primary source
CGNC:3031
See related
Ensembl:ENSGALG00010028528
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See UHRF1 in Genome Data Viewer
Location:
chromosome: 28
Exon count:
20
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 28 NC_052559.1 (5277655..5308196, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 28 NC_052600.1 (4839723..4870256, complement)

Chromosome 28 - NC_052559.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase, receptor type S Neighboring gene uncharacterized LOC107055377 Neighboring gene lysine demethylase 4B Neighboring gene uncharacterized LOC124417447 Neighboring gene uncharacterized LOC121107763 Neighboring gene perilipin 3 Neighboring gene toll like receptor adaptor molecule 1 Neighboring gene fem-1 homolog A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. UHRF genes regulate programmed interdigital tissue regression and chondrogenesis in the embryonic limb. Sanchez-Fernandez C, et al. Cell Death Dis, 2019 Apr 25. PMID 31024001, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of gene expression via chromosomal CpG island methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase UHRF1
Names
ubiquitin-like, containing PHD and RING finger domains, 1
XP_015155673.3
XP_025000087.2
XP_040548938.2
XP_040548939.2
XP_046760687.1
XP_046760688.1
XP_046789966.1
XP_046789967.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052559.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    5277655..5308196 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046904732.1 → XP_046760688.1  E3 ubiquitin-protein ligase UHRF1 isoform X3

    UniProtKB/TrEMBL
    A0A8V1AKV1

  2. XM_046904731.1 → XP_046760687.1  E3 ubiquitin-protein ligase UHRF1 isoform X3

    UniProtKB/TrEMBL
    A0A8V1AKV1

  3. XM_025144319.3 → XP_025000087.2  E3 ubiquitin-protein ligase UHRF1 isoform X2

    UniProtKB/TrEMBL
    A0A8V1AKV1

  4. XM_015300187.4 → XP_015155673.3  E3 ubiquitin-protein ligase UHRF1 isoform X1

    UniProtKB/TrEMBL
    A0A8V1AKV1
    Related
    ENSGALP00010042527.1, ENSGALT00010069085.1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052600.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    4839723..4870256 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046934011.1 → XP_046789967.1  E3 ubiquitin-protein ligase UHRF1 isoform X3

    UniProtKB/TrEMBL
    A0A8V1AKV1

  2. XM_046934010.1 → XP_046789966.1  E3 ubiquitin-protein ligase UHRF1 isoform X3

    UniProtKB/TrEMBL
    A0A8V1AKV1

  3. XM_040693005.2 → XP_040548939.2  E3 ubiquitin-protein ligase UHRF1 isoform X2

    UniProtKB/TrEMBL
    A0A8V1AKV1

  4. XM_040693004.2 → XP_040548938.2  E3 ubiquitin-protein ligase UHRF1 isoform X1

    UniProtKB/TrEMBL
    A0A8V1AKV1
Nucleotide Protein Strain
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