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KLHL18 kelch like family member 18 [ Gallus gallus (chicken) ]

Gene ID: 420406, updated on 17-Aug-2024

Summary

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Symbol
KLHL18provided by CGNC
Full Name
kelch like family member 18provided by CGNC
Primary source
CGNC:4157
See related
Ensembl:ENSGALG00010025925
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See KLHL18 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
14
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (3985299..4006904)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (3987739..4009341)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene SET domain containing 2 Neighboring gene uncharacterized LOC121110138 Neighboring gene kinesin family member 9 Neighboring gene uncharacterized LOC124417717 Neighboring gene cathelicidin 3 Neighboring gene cathelicidin 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kelch-like protein 18
Names
kelch-like 18

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001030960.3 → NP_001026131.2  kelch-like protein 18

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000035
    Conserved Domains (4) summary
    PHA03098
    Location:39 → 562
    PHA03098; kelch-like protein; Provisional
    sd00038
    Location:336 → 379
    Kelch; KELCH repeat [structural motif]
    cd18247
    Location:24 → 139
    BTB_POZ_KLHL18; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Kelch-like protein 18 (KLHL18)
    cd18457
    Location:140 → 246
    BACK_KLHL18; BACK (BTB and C-terminal Kelch) domain found in Kelch-like protein 18 (KLHL18)

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    3985299..4006904
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046921243.1 → XP_046777199.1  kelch-like protein 18 isoform X3

  2. XM_046921261.1 → XP_046777217.1  kelch-like protein 18 isoform X6

    UniProtKB/TrEMBL
    A0A3Q3AZL7
    Related
    ENSGALP00010039014.1, ENSGALT00010063203.1

  3. XM_046921269.1 → XP_046777225.1  kelch-like protein 18 isoform X7

  4. XM_015281088.4 → XP_015136574.2  kelch-like protein 18 isoform X1

    UniProtKB/TrEMBL
    A0A8V1A9R5
    Related
    ENSGALP00010039016.1, ENSGALT00010063207.1
    Conserved Domains (5) summary
    PHA03098
    Location:39 → 511
    PHA03098; kelch-like protein; Provisional
    sd00038
    Location:331 → 374
    Kelch; KELCH repeat [structural motif]
    cd18247
    Location:24 → 139
    BTB_POZ_KLHL18; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Kelch-like protein 18 (KLHL18)
    cd18457
    Location:140 → 246
    BACK_KLHL18; BACK (BTB and C-terminal Kelch) domain found in Kelch-like protein 18 (KLHL18)
    pfam01344
    Location:518 → 562
    Kelch_1; Kelch motif

  5. XM_015281091.4 → XP_015136577.1  kelch-like protein 18 isoform X4

    Conserved Domains (6) summary
    smart00612
    Location:349 → 395
    Kelch; Kelch domain
    PHA03098
    Location:4 → 517
    PHA03098; kelch-like protein; Provisional
    sd00038
    Location:291 → 334
    Kelch; KELCH repeat [structural motif]
    pfam00651
    Location:3 → 91
    BTB; BTB/POZ domain
    pfam01344
    Location:290 → 335
    Kelch_1; Kelch motif
    pfam07707
    Location:100 → 202
    BACK; BTB And C-terminal Kelch

  6. XM_025147151.3 → XP_025002919.1  kelch-like protein 18 isoform X5

    UniProtKB/TrEMBL
    A0A3Q2TVA6
    Related
    ENSGALP00010039010.1, ENSGALT00010063197.1
    Conserved Domains (3) summary
    PHA03098
    Location:4 → 466
    PHA03098; kelch-like protein; Provisional
    sd00038
    Location:286 → 329
    Kelch; KELCH repeat [structural motif]
    pfam01344
    Location:473 → 517
    Kelch_1; Kelch motif

  7. XM_015281089.4 → XP_015136575.2  kelch-like protein 18 isoform X2

    Conserved Domains (3) summary
    PHA03098
    Location:22 → 541
    PHA03098; kelch-like protein; Provisional
    sd00038
    Location:315 → 358
    Kelch; KELCH repeat [structural motif]
    cd18457
    Location:119 → 225
    BACK_KLHL18; BACK (BTB and C-terminal Kelch) domain found in Kelch-like protein 18 (KLHL18)

  8. XM_015281093.4 → XP_015136579.1  kelch-like protein 18 isoform X8

    Conserved Domains (4) summary
    smart00612
    Location:277 → 323
    Kelch; Kelch domain
    sd00038
    Location:219 → 262
    Kelch; KELCH repeat [structural motif]
    pfam01344
    Location:218 → 263
    Kelch_1; Kelch motif
    pfam07707
    Location:28 → 130
    BACK; BTB And C-terminal Kelch

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    3987739..4009341
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046910865.1 → XP_046766821.1  kelch-like protein 18 isoform X3

  2. XM_046910868.1 → XP_046766824.1  kelch-like protein 18 isoform X6

    UniProtKB/TrEMBL
    A0A3Q3AZL7

  3. XM_046910869.1 → XP_046766825.1  kelch-like protein 18 isoform X7

  4. XM_046910863.1 → XP_046766819.1  kelch-like protein 18 isoform X1

    UniProtKB/TrEMBL
    A0A8V1A9R5

  5. XM_046910866.1 → XP_046766822.1  kelch-like protein 18 isoform X4

  6. XM_046910867.1 → XP_046766823.1  kelch-like protein 18 isoform X5

    UniProtKB/TrEMBL
    A0A3Q2TVA6

  7. XM_046910864.1 → XP_046766820.1  kelch-like protein 18 isoform X2

  8. XM_046910870.1 → XP_046766826.1  kelch-like protein 18 isoform X8

Nucleotide Protein Strain
Heading Accession and Version

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