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TRAK1 trafficking kinesin protein 1 [ Gallus gallus (chicken) ]

Gene ID: 420714, updated on 3-Dec-2024

Summary

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Symbol
TRAK1provided by CGNC
Full Name
trafficking kinesin protein 1provided by CGNC
Primary source
CGNC:9049
See related
Ensembl:ENSGALG00010016410
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See TRAK1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
23
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (43608730..43739806)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (43658754..43788750)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene catenin beta 1 Neighboring gene unc-51 like kinase 4 Neighboring gene transfer RNA arginine (anticodon ACG) Neighboring gene cholecystokinin Neighboring gene uncharacterized LOC121110089

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GABA receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anterograde axonal transport of mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosome to lysosome transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neurogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in dendrite IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trafficking kinesin-binding protein 1
Names
trafficking protein, kinesin binding 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    43608730..43739806
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046938177.1 → XP_046794133.1  trafficking kinesin-binding protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A8V0Z2J2

  2. XM_046938178.1 → XP_046794134.1  trafficking kinesin-binding protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A8V0Z2J2

  3. XM_040696040.2 → XP_040551974.1  trafficking kinesin-binding protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A8V0Z2J2
    Conserved Domains (1) summary
    COG1196
    Location:2 → 249
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  4. XM_046938176.1 → XP_046794132.1  trafficking kinesin-binding protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A8V0Z2J2

  5. XM_004939468.5 → XP_004939525.2  trafficking kinesin-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0Z2K5
    Related
    ENSGALP00010022841.1, ENSGALT00010039568.1
    Conserved Domains (1) summary
    COG1196
    Location:202 → 449
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  6. XM_418813.7 → XP_418813.4  trafficking kinesin-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0Z2K5
    Conserved Domains (1) summary
    COG1196
    Location:202 → 449
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  7. XM_025147511.3 → XP_025003279.1  trafficking kinesin-binding protein 1 isoform X7

    UniProtKB/TrEMBL
    A0A8V0YW45
    Related
    ENSGALP00010022839.1, ENSGALT00010039565.1
    Conserved Domains (2) summary
    pfam04849
    Location:146 → 449
    HAP1_N; HAP1 N-terminal conserved region
    pfam12448
    Location:510 → 678
    Milton; Kinesin associated protein

  8. XM_004939471.5 → XP_004939528.2  trafficking kinesin-binding protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A8V0Z2J2
    Related
    ENSGALP00010022831.1, ENSGALT00010039554.1
    Conserved Domains (1) summary
    COG1196
    Location:32 → 279
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  9. XM_004939479.5 → XP_004939536.3  trafficking kinesin-binding protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A8V0Z2J2
    Related
    ENSGALP00010022835.1, ENSGALT00010039559.1
    Conserved Domains (1) summary
    COG1196
    Location:32 → 279
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  10. XM_040696041.2 → XP_040551975.1  trafficking kinesin-binding protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A8V0Z2J2
    Conserved Domains (1) summary
    COG1196
    Location:2 → 249
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  11. XM_046938179.1 → XP_046794135.1  trafficking kinesin-binding protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A8V0Z2J2

  12. XM_004939470.5 → XP_004939527.2  trafficking kinesin-binding protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8V0YW29
    Related
    ENSGALP00010022824.1, ENSGALT00010039542.1
    Conserved Domains (1) summary
    TIGR02168
    Location:24 → 291
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    43658754..43788750
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046912235.1 → XP_046768191.1  trafficking kinesin-binding protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A8V0Z2J2

  2. XM_046912236.1 → XP_046768192.1  trafficking kinesin-binding protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A8V0Z2J2

  3. XM_040665788.2 → XP_040521722.1  trafficking kinesin-binding protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A8V0Z2J2
    Conserved Domains (1) summary
    COG1196
    Location:2 → 249
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  4. XM_046912234.1 → XP_046768190.1  trafficking kinesin-binding protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A8V0Z2J2

  5. XM_040665783.2 → XP_040521717.1  trafficking kinesin-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0Z2K5
    Conserved Domains (1) summary
    COG1196
    Location:202 → 449
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  6. XM_040665784.2 → XP_040521718.1  trafficking kinesin-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0Z2K5
    Conserved Domains (1) summary
    COG1196
    Location:202 → 449
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  7. XM_040665795.2 → XP_040521729.1  trafficking kinesin-binding protein 1 isoform X7

    UniProtKB/TrEMBL
    A0A8V0YW45
    Conserved Domains (2) summary
    pfam04849
    Location:146 → 449
    HAP1_N; HAP1 N-terminal conserved region
    pfam12448
    Location:510 → 678
    Milton; Kinesin associated protein

  8. XM_040665787.2 → XP_040521721.1  trafficking kinesin-binding protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A8V0Z2J2
    Conserved Domains (1) summary
    COG1196
    Location:32 → 279
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  9. XM_040665791.2 → XP_040521725.1  trafficking kinesin-binding protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A8V0Z2J2
    Conserved Domains (1) summary
    COG1196
    Location:32 → 279
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  10. XM_040665789.2 → XP_040521723.1  trafficking kinesin-binding protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A8V0Z2J2
    Conserved Domains (1) summary
    COG1196
    Location:2 → 249
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  11. XM_046912237.1 → XP_046768193.1  trafficking kinesin-binding protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A8V0Z2J2

  12. XM_040665785.2 → XP_040521719.1  trafficking kinesin-binding protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8V0YW29
    Conserved Domains (1) summary
    TIGR02168
    Location:24 → 291
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
Nucleotide Protein
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