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GLIPR2 GLI pathogenesis related 2 [ Gallus gallus (chicken) ]

Gene ID: 420999, updated on 17-Aug-2024

Summary

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Official Symbol
GLIPR2provided by CGNC
Official Full Name
GLI pathogenesis related 2provided by CGNC
Primary source
CGNC:10184
See related
Ensembl:ENSGALG00010007940
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
C9orf19
Orthologs
human mouse all
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Genomic context

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See GLIPR2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (89365004..89390348, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (89450158..89475471, complement)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene transfer RNA valine (anticodon AAC) Neighboring gene transfer RNA valine (anticodon AAC) Neighboring gene biogenesis of lysosomal organelles complex 1 subunit 4 Neighboring gene par-6 family cell polarity regulator gamma

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Golgi-associated plant pathogenesis-related protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    89365004..89390348 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_419085.8 → XP_419085.1  Golgi-associated plant pathogenesis-related protein 1

    UniProtKB/TrEMBL
    A0A8V0XWV9, R4GGF3
    Related
    ENSGALP00010010482.1, ENSGALT00010018933.1
    Conserved Domains (1) summary
    cd05382
    Location:8 → 139
    CAP_GAPR1-like; CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain of Golgi-associated plant pathogenesis-related protein 1 and similar proteins

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    89450158..89475471 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040665851.2 → XP_040521785.1  Golgi-associated plant pathogenesis-related protein 1

    UniProtKB/TrEMBL
    A0A8V0XWV9, R4GGF3
    Conserved Domains (1) summary
    cd05382
    Location:8 → 139
    CAP_GAPR1-like; CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain of Golgi-associated plant pathogenesis-related protein 1 and similar proteins
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases
Research Materials