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RNPEP arginyl aminopeptidase [ Gallus gallus (chicken) ]

Gene ID: 421165, updated on 3-Dec-2024

Summary

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Official Symbol
RNPEPprovided by CGNC
Official Full Name
arginyl aminopeptidaseprovided by CGNC
Primary source
CGNC:219
See related
Ensembl:ENSGALG00010026143
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See RNPEP in Genome Data Viewer
Location:
chromosome: 26
Exon count:
12
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 26 NC_052557.1 (653732..658740, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 26 NC_052598.1 (622999..627993, complement)

Chromosome 26 - NC_052557.1Genomic Context describing neighboring genes Neighboring gene importin 9 Neighboring gene leucine zipper like transcription regulator 1 Neighboring gene neuron navigator 1 Neighboring gene synaptotagmin 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloaminopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aminopeptidase B
XP_015154357.1
XP_040547260.2
XP_040547261.2
XP_419245.5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052557.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    653732..658740 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_419245.8 → XP_419245.5  aminopeptidase B isoform X1

    UniProtKB/TrEMBL
    A0A8V1A0A4, A0A8V1A5H0
    Related
    ENSGALP00010039299.1, ENSGALT00010063672.1
    Conserved Domains (3) summary
    cd09599
    Location:21 → 469
    M1_LTA4H; Peptidase M1 family contains leukotriene A4 hydrolase
    TIGR02411
    Location:21 → 630
    leuko_A4_hydro; leukotriene A-4 hydrolase/aminopeptidase
    pfam09127
    Location:489 → 629
    Leuk-A4-hydro_C; Leukotriene A4 hydrolase, C-terminal

  2. XM_015298871.4 → XP_015154357.1  aminopeptidase B isoform X2

    UniProtKB/TrEMBL
    A0A8V1A5H0, A0A8V1AAK3
    Related
    ENSGALP00010039303.1, ENSGALT00010063683.1
    Conserved Domains (3) summary
    cd09599
    Location:21 → 469
    M1_LTA4H; Peptidase M1 family contains leukotriene A4 hydrolase
    TIGR02411
    Location:21 → 630
    leuko_A4_hydro; leukotriene A-4 hydrolase/aminopeptidase
    pfam09127
    Location:489 → 629
    Leuk-A4-hydro_C; Leukotriene A4 hydrolase, C-terminal

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052598.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    622999..627993 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040691327.2 → XP_040547261.2  aminopeptidase B isoform X1

    UniProtKB/TrEMBL
    A0A8V1A0A4, A0A8V1A5H0

  2. XM_040691326.2 → XP_040547260.2  aminopeptidase B isoform X2

    UniProtKB/TrEMBL
    A0A8V1A5H0, A0A8V1AAK3
Nucleotide Protein Strain
Heading Accession and Version

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