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TBC1D22B TBC1 domain family member 22B [ Gallus gallus (chicken) ]

Gene ID: 421181, updated on 17-Aug-2024

Summary

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Symbol
TBC1D22Bprovided by CGNC
Full Name
TBC1 domain family member 22Bprovided by CGNC
Primary source
CGNC:481
See related
Ensembl:ENSGALG00010027080
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See TBC1D22B in Genome Data Viewer
Location:
chromosome: 26
Exon count:
14
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 26 NC_052557.1 (253439..269669, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 26 NC_052598.1 (222471..238707, complement)

Chromosome 26 - NC_052557.1Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase 13 Neighboring gene uncharacterized LOC771161 Neighboring gene bromodomain and PHD finger containing 3 Neighboring gene uncharacterized LOC101747295 Neighboring gene Pim-1 proto-oncogene, serine/threonine kinase Neighboring gene calcium voltage-gated channel subunit alpha1 S

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in activation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TBC1 domain family member 22B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052557.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    253439..269669 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004934806.5 → XP_004934863.1  TBC1 domain family member 22B isoform X2

    UniProtKB/TrEMBL
    A0A8V1ACE8
    Conserved Domains (1) summary
    smart00164
    Location:190 → 440
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  2. XM_419261.8 → XP_419261.3  TBC1 domain family member 22B isoform X1

    UniProtKB/TrEMBL
    A0A8V1ACE8
    Related
    ENSGALP00010039901.1, ENSGALT00010065635.1
    Conserved Domains (1) summary
    smart00164
    Location:209 → 459
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  3. XM_015298737.4 → XP_015154223.1  TBC1 domain family member 22B isoform X4

    UniProtKB/TrEMBL
    A0A8V1ACE8
    Conserved Domains (1) summary
    smart00164
    Location:159 → 409
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  4. XM_025143860.3 → XP_024999628.1  TBC1 domain family member 22B isoform X3

    UniProtKB/TrEMBL
    A0A8V1A703, A0A8V1ACE8
    Related
    ENSGALP00010039900.1, ENSGALT00010065634.1
    Conserved Domains (1) summary
    smart00164
    Location:176 → 426
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052598.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    222471..238707 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040691285.2 → XP_040547219.1  TBC1 domain family member 22B isoform X2

    UniProtKB/TrEMBL
    A0A8V1ACE8
    Conserved Domains (1) summary
    smart00164
    Location:190 → 440
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  2. XM_040691284.2 → XP_040547218.1  TBC1 domain family member 22B isoform X1

    UniProtKB/TrEMBL
    A0A8V1ACE8
    Conserved Domains (1) summary
    smart00164
    Location:209 → 459
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  3. XM_040691287.2 → XP_040547221.1  TBC1 domain family member 22B isoform X4

    UniProtKB/TrEMBL
    A0A8V1ACE8
    Conserved Domains (1) summary
    smart00164
    Location:159 → 409
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  4. XM_040691286.2 → XP_040547220.1  TBC1 domain family member 22B isoform X3

    UniProtKB/TrEMBL
    A0A8V1A703, A0A8V1ACE8
    Conserved Domains (1) summary
    smart00164
    Location:176 → 426
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
Nucleotide Protein
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