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CG7218 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 42165, updated on 9-Dec-2024

Summary

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Official Symbol
CG7218provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0038569
Locus tag
Dmel_CG7218
See related
AllianceGenome:FB:FBgn0038569
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG7218
Summary
Predicted to be involved in positive regulation of cilium assembly. Predicted to be active in ciliary basal body and endoplasmic reticulum membrane. Is expressed in adult head and organism. Orthologous to human TAPT1 (transmembrane anterior posterior transformation 1). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG7218 in Genome Data Viewer
Location:
90F4-90F4; 3-62 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (18161392..18164397, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (13987114..13990119, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45103 Neighboring gene antisense RNA:CR45104 Neighboring gene uncharacterized protein Neighboring gene cap binding protein 20 Neighboring gene uncharacterized protein Neighboring gene Peroxiredoxin 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes. López-Varea A, et al. G3 (Bethesda), 2021 Dec 8. PMID 34599810, Free PMC Article
  2. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article
  3. A global in vivo Drosophila RNAi screen identifies NOT3 as a conserved regulator of heart function. Neely GG, et al. Cell, 2010 Apr 2. PMID 20371351, Free PMC Article
  4. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article
  5. Systematic genetic analysis of muscle morphogenesis and function in Drosophila. Schnorrer F, et al. Nature, 2010 Mar 11. PMID 20220848

See all (20) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in positive regulation of cilium assembly IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in ciliary basal body IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in endoplasmic reticulum membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG7218-PA
CG7218-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    18161392..18164397 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001300456.1 → NP_001287385.1  uncharacterized protein Dmel_CG7218, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001287385.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VED0
    UniProtKB/TrEMBL
    A0A0B4LH99
    Conserved Domains (1) summary
    pfam05346
    Location:166 → 470
    DUF747; Eukaryotic membrane protein family

  2. NM_142421.4 → NP_650678.1  uncharacterized protein Dmel_CG7218, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_650678.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VED0
    UniProtKB/TrEMBL
    A0A0B4LH99
    Related
    FBpp0083043
    Conserved Domains (1) summary
    pfam05346
    Location:166 → 470
    DUF747; Eukaryotic membrane protein family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A0A0B4LH99 A0A0B4LH99
Q9VED0.2 Q9VED0

Gene LinkOut

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