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HIVEP2 HIVEP zinc finger 2 [ Gallus gallus (chicken) ]

Gene ID: 421672, updated on 17-Aug-2024

Summary

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Symbol
HIVEP2provided by CGNC
Full Name
HIVEP zinc finger 2provided by CGNC
Primary source
CGNC:10330
See related
Ensembl:ENSGALG00010005758
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See HIVEP2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
15
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (52332530..52459133)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (52239070..52365526)

Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene peroxisomal biogenesis factor 3 Neighboring gene adenosine deaminase, tRNA specific 2 Neighboring gene androgen induced 1 Neighboring gene uncharacterized LOC121110497 Neighboring gene uncharacterized LOC101751314 Neighboring gene uncharacterized LOC121110203

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor HIVEP2
Names
human immunodeficiency virus type I enhancer binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    52332530..52459133
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046939726.1 → XP_046795682.1  transcription factor HIVEP2

    UniProtKB/TrEMBL
    A0A8V0XT29

  2. XM_046939733.1 → XP_046795689.1  transcription factor HIVEP2

    UniProtKB/TrEMBL
    A0A8V0XT29

  3. XM_046939730.1 → XP_046795686.1  transcription factor HIVEP2

    UniProtKB/TrEMBL
    A0A8V0XT29

  4. XM_046939725.1 → XP_046795681.1  transcription factor HIVEP2

    UniProtKB/TrEMBL
    A0A8V0XT29

  5. XM_046939732.1 → XP_046795688.1  transcription factor HIVEP2

    UniProtKB/TrEMBL
    A0A8V0XT29

  6. XM_046939731.1 → XP_046795687.1  transcription factor HIVEP2

    UniProtKB/TrEMBL
    A0A8V0XT29

  7. XM_004935681.5 → XP_004935738.2  transcription factor HIVEP2

    UniProtKB/TrEMBL
    A0A8V0XT29

  8. XM_015284201.4 → XP_015139687.2  transcription factor HIVEP2

    UniProtKB/TrEMBL
    A0A8V0XT29

  9. XM_015284198.4 → XP_015139684.2  transcription factor HIVEP2

    UniProtKB/TrEMBL
    A0A8V0XT29

  10. XM_040698470.2 → XP_040554404.1  transcription factor HIVEP2

    UniProtKB/TrEMBL
    A0A8V0XT29

  11. XM_046939734.1 → XP_046795690.1  transcription factor HIVEP2

    UniProtKB/TrEMBL
    A0A8V0XT29

  12. XM_046939729.1 → XP_046795685.1  transcription factor HIVEP2

    UniProtKB/TrEMBL
    A0A8V0XT29

  13. XM_040698467.2 → XP_040554401.1  transcription factor HIVEP2

    UniProtKB/TrEMBL
    A0A8V0XT29

  14. XM_046939728.1 → XP_046795684.1  transcription factor HIVEP2

    UniProtKB/TrEMBL
    A0A8V0XT29

  15. XM_040698469.2 → XP_040554403.1  transcription factor HIVEP2

    UniProtKB/TrEMBL
    A0A8V0XT29

  16. XM_046939735.1 → XP_046795691.1  transcription factor HIVEP2

    UniProtKB/TrEMBL
    A0A8V0XT29
    Related
    ENSGALP00010008121.1, ENSGALT00010013728.1

  17. XM_040698468.2 → XP_040554402.1  transcription factor HIVEP2

    UniProtKB/TrEMBL
    A0A8V0XT29

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    52239070..52365526
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046915125.1 → XP_046771081.1  transcription factor HIVEP2

  2. XM_046915131.1 → XP_046771087.1  transcription factor HIVEP2

  3. XM_046915128.1 → XP_046771084.1  transcription factor HIVEP2

  4. XM_046915124.1 → XP_046771080.1  transcription factor HIVEP2

  5. XM_046915130.1 → XP_046771086.1  transcription factor HIVEP2

  6. XM_046915129.1 → XP_046771085.1  transcription factor HIVEP2

  7. XM_040668995.2 → XP_040524929.1  transcription factor HIVEP2

    Conserved Domains (5) summary
    PTZ00449
    Location:2132 → 2213
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    sd00017
    Location:248 → 268
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1877 → 1897
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:1875 → 1897
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:261 → 285
    zf-H2C2_2; Zinc-finger double domain

  8. XM_040669003.2 → XP_040524937.1  transcription factor HIVEP2

    Conserved Domains (5) summary
    PTZ00449
    Location:2132 → 2213
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    sd00017
    Location:248 → 268
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1877 → 1897
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:1875 → 1897
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:261 → 285
    zf-H2C2_2; Zinc-finger double domain

  9. XM_040669000.2 → XP_040524934.1  transcription factor HIVEP2

    Conserved Domains (5) summary
    PTZ00449
    Location:2132 → 2213
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    sd00017
    Location:248 → 268
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1877 → 1897
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:1875 → 1897
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:261 → 285
    zf-H2C2_2; Zinc-finger double domain

  10. XM_040669002.2 → XP_040524936.1  transcription factor HIVEP2

    Conserved Domains (5) summary
    PTZ00449
    Location:2132 → 2213
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    sd00017
    Location:248 → 268
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1877 → 1897
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:1875 → 1897
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:261 → 285
    zf-H2C2_2; Zinc-finger double domain

  11. XM_046915132.1 → XP_046771088.1  transcription factor HIVEP2

  12. XM_046915127.1 → XP_046771083.1  transcription factor HIVEP2

  13. XM_040668996.2 → XP_040524930.1  transcription factor HIVEP2

    Conserved Domains (5) summary
    PTZ00449
    Location:2132 → 2213
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    sd00017
    Location:248 → 268
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1877 → 1897
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:1875 → 1897
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:261 → 285
    zf-H2C2_2; Zinc-finger double domain

  14. XM_046915126.1 → XP_046771082.1  transcription factor HIVEP2

  15. XM_040669001.2 → XP_040524935.1  transcription factor HIVEP2

    Conserved Domains (5) summary
    PTZ00449
    Location:2132 → 2213
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    sd00017
    Location:248 → 268
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1877 → 1897
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:1875 → 1897
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:261 → 285
    zf-H2C2_2; Zinc-finger double domain

  16. XM_046915133.1 → XP_046771089.1  transcription factor HIVEP2

  17. XM_040668999.2 → XP_040524933.1  transcription factor HIVEP2

    Conserved Domains (5) summary
    PTZ00449
    Location:2132 → 2213
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    sd00017
    Location:248 → 268
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1877 → 1897
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:1875 → 1897
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:261 → 285
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein Strain
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