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LOC422276 sodium/hydrogen exchanger 2-like [ Gallus gallus (chicken) ]

Gene ID: 422276, updated on 17-Aug-2024

Summary

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Symbol
LOC422276provided by CGNC
Full Name
sodium/hydrogen exchanger 2-likeprovided by CGNC
Primary source
CGNC:51683
See related
Ensembl:ENSGALG00010014306
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
SOHYE2L
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Genomic context

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See LOC422276 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
13
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (9257847..9290768, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (9291837..9324758, complement)

Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121110641 Neighboring gene transmembrane protein 182-like Neighboring gene uncharacterized LOC101750621 Neighboring gene SH3 domain binding glutamate rich protein like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sodium:proton antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of pH IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium/hydrogen exchanger 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    9257847..9290768 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_420258.7 → XP_420258.3  sodium/hydrogen exchanger 2

    UniProtKB/TrEMBL
    A0A8V0YHB1
    Related
    ENSGALP00010020250.1, ENSGALT00010034469.1
    Conserved Domains (1) summary
    TIGR00840
    Location:61 → 616
    b_cpa1; sodium/hydrogen exchanger 3

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    9291837..9324758 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040670802.2 → XP_040526736.1  sodium/hydrogen exchanger 2

    UniProtKB/TrEMBL
    A0A8V0YHB1
    Conserved Domains (1) summary
    TIGR00840
    Location:61 → 616
    b_cpa1; sodium/hydrogen exchanger 3
Nucleotide Protein
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