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SCARB2 scavenger receptor class B member 2 [ Gallus gallus (chicken) ]

Gene ID: 422638, updated on 26-Nov-2024

Summary

Official Symbol
SCARB2provided by CGNC
Official Full Name
scavenger receptor class B member 2provided by CGNC
Primary source
CGNC:8738
See related
Ensembl:ENSGALG00010004104
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
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Genomic context

See SCARB2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
12
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (49422804..49443508)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (49426935..49447640)

Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107051726 Neighboring gene protein FAM47E Neighboring gene starch binding domain 1 Neighboring gene nucleoporin 54 Neighboring gene protein phosphatase with EF-hand domain 2 Neighboring gene uncharacterized LOC112532331

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables scavenger receptor activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in protein targeting to lysosome IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in receptor-mediated endocytosis IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in regulation of glucosylceramidase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in lysosome IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
lysosome membrane protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    49422804..49443508
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_420593.8XP_420593.1  lysosome membrane protein 2

    UniProtKB/TrEMBL
    A0A8V0XIN8, E1BRR6
    Related
    ENSGALP00010005623.1, ENSGALT00010009561.1
    Conserved Domains (1) summary
    pfam01130
    Location:11460
    CD36; CD36 family

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    49426935..49447640
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040670845.2XP_040526779.1  lysosome membrane protein 2

    UniProtKB/TrEMBL
    A0A8V0XIN8, E1BRR6
    Conserved Domains (1) summary
    pfam01130
    Location:11460
    CD36; CD36 family