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ZFYVE28A zinc finger FYVE-type containing 28A [ Gallus gallus (chicken) ]

Gene ID: 422889, updated on 17-Aug-2024

Summary

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Official Symbol
ZFYVE28Aprovided by CGNC
Official Full Name
zinc finger FYVE-type containing 28Aprovided by CGNC
Primary source
CGNC:11700
See related
Ensembl:ENSGALG00010017586
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
ZFYVE28
Orthologs
human mouse all
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Genomic context

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See ZFYVE28A in Genome Data Viewer
Location:
chromosome: 4
Exon count:
15
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (82153082..82295996)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (82131358..82274226)

Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 4 Neighboring gene cilia and flagella associated protein 99 Neighboring gene microRNA 6661 Neighboring gene uncharacterized LOC107053323 Neighboring gene microRNA 7467 Neighboring gene uncharacterized LOC121110567

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of epidermal growth factor-activated receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in early endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lateral signaling target protein 2 homolog
Names
zinc finger FYVE-type containing 28
zinc finger, FYVE domain containing 28

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    82153082..82295996
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004936224.5 → XP_004936281.1  lateral signaling target protein 2 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8V0Z1R1, A0A8V0Z992
    Related
    ENSGALP00010025009.1, ENSGALT00010042519.1
    Conserved Domains (1) summary
    cd15731
    Location:883 → 947
    FYVE_LST2; FYVE domain found in lateral signaling target protein 2 homolog (Lst2) and similar proteins

  2. XM_040699328.2 → XP_040555262.1  lateral signaling target protein 2 homolog isoform X4

    UniProtKB/TrEMBL
    A0A8V0Z1R1
    Conserved Domains (1) summary
    cd15731
    Location:848 → 912
    FYVE_LST2; FYVE domain found in lateral signaling target protein 2 homolog (Lst2) and similar proteins

  3. XM_015286015.4 → XP_015141501.1  lateral signaling target protein 2 homolog isoform X2

    UniProtKB/TrEMBL
    A0A8V0Z1R1
    Conserved Domains (1) summary
    cd15731
    Location:882 → 946
    FYVE_LST2; FYVE domain found in lateral signaling target protein 2 homolog (Lst2) and similar proteins

  4. XM_420832.8 → XP_420832.4  lateral signaling target protein 2 homolog isoform X3

    UniProtKB/TrEMBL
    A0A8V0YVC2, A0A8V0Z1R1
    Related
    ENSGALP00010025008.1, ENSGALT00010042518.1
    Conserved Domains (1) summary
    cd15731
    Location:848 → 912
    FYVE_LST2; FYVE domain found in lateral signaling target protein 2 homolog (Lst2) and similar proteins

  5. XM_015286016.4 → XP_015141502.1  lateral signaling target protein 2 homolog isoform X5

    UniProtKB/TrEMBL
    A0A8V0Z1R1
    Conserved Domains (1) summary
    cd15731
    Location:847 → 911
    FYVE_LST2; FYVE domain found in lateral signaling target protein 2 homolog (Lst2) and similar proteins

  6. XM_040699329.2 → XP_040555263.1  lateral signaling target protein 2 homolog isoform X6

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    82131358..82274226
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040670172.2 → XP_040526106.1  lateral signaling target protein 2 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8V0Z1R1, A0A8V0Z992
    Conserved Domains (1) summary
    cd15731
    Location:883 → 947
    FYVE_LST2; FYVE domain found in lateral signaling target protein 2 homolog (Lst2) and similar proteins

  2. XM_040670175.2 → XP_040526109.1  lateral signaling target protein 2 homolog isoform X4

    UniProtKB/TrEMBL
    A0A8V0Z1R1
    Conserved Domains (1) summary
    cd15731
    Location:848 → 912
    FYVE_LST2; FYVE domain found in lateral signaling target protein 2 homolog (Lst2) and similar proteins

  3. XM_040670173.2 → XP_040526107.1  lateral signaling target protein 2 homolog isoform X2

    UniProtKB/TrEMBL
    A0A8V0Z1R1
    Conserved Domains (1) summary
    cd15731
    Location:882 → 946
    FYVE_LST2; FYVE domain found in lateral signaling target protein 2 homolog (Lst2) and similar proteins

  4. XM_040670174.2 → XP_040526108.1  lateral signaling target protein 2 homolog isoform X3

    UniProtKB/TrEMBL
    A0A8V0YVC2, A0A8V0Z1R1
    Conserved Domains (1) summary
    cd15731
    Location:848 → 912
    FYVE_LST2; FYVE domain found in lateral signaling target protein 2 homolog (Lst2) and similar proteins

  5. XM_040670176.2 → XP_040526110.1  lateral signaling target protein 2 homolog isoform X5

    UniProtKB/TrEMBL
    A0A8V0Z1R1
    Conserved Domains (1) summary
    cd15731
    Location:847 → 911
    FYVE_LST2; FYVE domain found in lateral signaling target protein 2 homolog (Lst2) and similar proteins

  6. XM_040670177.2 → XP_040526111.1  lateral signaling target protein 2 homolog isoform X6

Nucleotide Protein
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