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BTBD10 BTB domain containing 10 [ Gallus gallus (chicken) ]

Gene ID: 423029, updated on 3-Dec-2024

Summary

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Symbol
BTBD10provided by CGNC
Full Name
BTB domain containing 10provided by CGNC
Primary source
CGNC:4000
See related
Ensembl:ENSGALG00010021681
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See BTBD10 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
14
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (7208094..7233400)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (7176797..7201878)

Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene ovochymase 2 Neighboring gene fatty acyl-CoA reductase 1 Neighboring gene parathyroid hormone Neighboring gene uncharacterized LOC121110985 Neighboring gene aryl hydrocarbon receptor nuclear translocator like Neighboring gene Ras association domain family member 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. ESTs from brain and testis of White Leghorn and red junglefowl: annotation, bioinformatic classification of unknown transcripts and analysis of expression levels. Savolainen P, et al. Cytogenet Genome Res, 2005. PMID 16093725
  2. Chicken genomics resource: sequencing and annotation of 35,407 ESTs from single and multiple tissue cDNA libraries and CAP3 assembly of a chicken gene index. Carre W, et al. Physiol Genomics, 2006 May 16. PMID 16554550
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BTB/POZ domain-containing protein 10
Names
BTB (POZ) domain containing 10

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001199575.2 → NP_001186504.1  BTB/POZ domain-containing protein 10

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000214
    UniProtKB/TrEMBL
    A0A8V0ZJM7, E1C8S4
    Related
    ENSGALP00010031580.1, ENSGALT00010052674.1
    Conserved Domains (1) summary
    pfam16017
    Location:208 → 437
    BTB_3; BTB/POZ domain

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    7208094..7233400
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046941599.1 → XP_046797555.1  BTB/POZ domain-containing protein 10 isoform X1

    UniProtKB/TrEMBL
    A0A1D5P2C7, R4GI02

  2. XM_046941598.1 → XP_046797554.1  BTB/POZ domain-containing protein 10 isoform X1

    UniProtKB/TrEMBL
    A0A1D5P2C7, R4GI02

  3. XM_015286364.4 → XP_015141850.1  BTB/POZ domain-containing protein 10 isoform X1

    UniProtKB/TrEMBL
    A0A1D5P2C7, R4GI02
    Related
    ENSGALP00010031594.1, ENSGALT00010052688.1
    Conserved Domains (1) summary
    pfam16017
    Location:167 → 272
    BTB_3; BTB/POZ domain

  4. XM_015286367.4 → XP_015141853.1  BTB/POZ domain-containing protein 10 isoform X2

    UniProtKB/TrEMBL
    A0A1D5P2C7
    Related
    ENSGALP00010031588.1, ENSGALT00010052682.1
    Conserved Domains (1) summary
    pfam16017
    Location:153 → 382
    BTB_3; BTB/POZ domain

  5. XM_046941600.1 → XP_046797556.1  BTB/POZ domain-containing protein 10 isoform X2

    UniProtKB/TrEMBL
    A0A1D5P2C7

  6. XM_015286365.4 → XP_015141851.1  BTB/POZ domain-containing protein 10 isoform X1

    UniProtKB/TrEMBL
    A0A1D5P2C7, R4GI02
    Related
    ENSGALP00010031590.1, ENSGALT00010052684.1
    Conserved Domains (1) summary
    pfam16017
    Location:167 → 272
    BTB_3; BTB/POZ domain

  7. XM_046941601.1 → XP_046797557.1  BTB/POZ domain-containing protein 10 isoform X3

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    7176797..7201878
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046918130.1 → XP_046774086.1  BTB/POZ domain-containing protein 10 isoform X1

    UniProtKB/TrEMBL
    A0A1D5P2C7, R4GI02

  2. XM_046918128.1 → XP_046774084.1  BTB/POZ domain-containing protein 10 isoform X1

    UniProtKB/TrEMBL
    A0A1D5P2C7, R4GI02

  3. XM_046918129.1 → XP_046774085.1  BTB/POZ domain-containing protein 10 isoform X1

    UniProtKB/TrEMBL
    A0A1D5P2C7, R4GI02

  4. XM_046918127.1 → XP_046774083.1  BTB/POZ domain-containing protein 10 isoform X1

    UniProtKB/TrEMBL
    A0A1D5P2C7, R4GI02

  5. XM_046918131.1 → XP_046774087.1  BTB/POZ domain-containing protein 10 isoform X2

    UniProtKB/TrEMBL
    A0A1D5P2C7

  6. XM_046918132.1 → XP_046774088.1  BTB/POZ domain-containing protein 10 isoform X2

    UniProtKB/TrEMBL
    A0A1D5P2C7

  7. XM_046918133.1 → XP_046774089.1  BTB/POZ domain-containing protein 10 isoform X3

Nucleotide Protein Strain
Heading Accession and Version

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