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vib vibrator [ Drosophila melanogaster (fruit fly) ]

Gene ID: 42306, updated on 4-Jan-2025

Summary

Official Symbol
vibprovided by FlyBase
Official Full Name
vibratorprovided by FlyBase
Primary source
FLYBASE:FBgn0267975
Locus tag
Dmel_CG5269
See related
AllianceGenome:FB:FBgn0267975
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
0450/02; 1104/16; anon-WO0142479.3; anon-WO0172774.12; anon-WO0172774.16; anon-WO0172774.28; CG5269; Dm-PITPalpha; Dmel\CG5269; gio; Gio; giotto; l(3)j4A3; l(3)j5A6; l(3)j7A3; l(3)j7C8; l(3)S045002; l(3)S045002c; l(3)S110416; PITP; PITP-DM; Vib
Summary
Predicted to enable phospholipid binding activity and phospholipid transporter activity. Involved in cytoskeleton-dependent cytokinesis; meiotic spindle organization; and spermatocyte division. Located in several cellular components, including Nebenkern; cleavage furrow; and spindle envelope. Is expressed in several structures, including adult head; adult heart; embryonic/larval fat body; gut section; and spermatocyte. Orthologous to human PITPNA (phosphatidylinositol transfer protein alpha) and PITPNB (phosphatidylinositol transfer protein beta). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See vib in Genome Data Viewer
Location:
91F11-91F12; 3-66 cM
Exon count:
10
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (19215434..19226651, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (15041156..15052373, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene mayday Neighboring gene long non-coding RNA:CR46039 Neighboring gene long non-coding RNA:CR46393 Neighboring gene cryptochrome Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables phosphatidylcholine binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables phosphatidylcholine transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables phosphatidylinositol binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables phosphatidylinositol transfer activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables phospholipid transporter activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in actomyosin contractile ring contraction IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in cleavage furrow ingression IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in male meiosis cytokinesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in meiosis I cytokinesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in meiosis II cytokinesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in meiotic cytokinesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in meiotic spindle organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in phospholipid transport IEA
Inferred from Electronic Annotation
more info
 
involved_in spermatocyte division IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in spermatogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IDA
Inferred from Direct Assay
more info
PubMed 
located_in Nebenkern IDA
Inferred from Direct Assay
more info
PubMed 
located_in cleavage furrow IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nuclear membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in spindle envelope IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
vibrator
Names
CG5269-PA
CG5269-PB
CG5269-PC
PITP
giotto
lethal (3) S045002c
lethal (3) S110416
lethal (3) j5A6
vib-PA
vib-PB
vib-PC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    19215434..19226651 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001275797.1NP_001262726.1  vibrator, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001262726.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0B4KGG5, Q8T3L2
    Conserved Domains (1) summary
    cd08888
    Location:2261
    SRPBCC_PITPNA-B_like; Lipid-binding SRPBCC domain of mammalian PITPNA, -B, and related proteins (Class I PITPs)
  2. NM_001300473.1NP_001287402.1  vibrator, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001287402.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8T3L2, Q9VDY8
    Conserved Domains (1) summary
    cd08888
    Location:2260
    SRPBCC_PITPNA-B_like; Lipid-binding SRPBCC domain of mammalian PITPNA, -B, and related proteins (Class I PITPs)
  3. NM_079680.2NP_524404.1  vibrator, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_524404.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8T3L2, Q9VDY8
    Related
    FBpp0083159, FBtr0083745
    Conserved Domains (1) summary
    cd08888
    Location:2260
    SRPBCC_PITPNA-B_like; Lipid-binding SRPBCC domain of mammalian PITPNA, -B, and related proteins (Class I PITPs)