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CDAN1 codanin 1 [ Gallus gallus (chicken) ]

Gene ID: 423239, updated on 3-Dec-2024

Summary

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Symbol
CDAN1provided by CGNC
Full Name
codanin 1provided by CGNC
Primary source
CGNC:6967
See related
Ensembl:ENSGALG00010019846
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See CDAN1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
34
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (25355061..25392302, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (25321892..25359030, complement)

Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 57 Neighboring gene HAUS augmin like complex subunit 2 Neighboring gene StAR related lipid transfer domain containing 9 Neighboring gene uncharacterized LOC121113275 Neighboring gene uncharacterized LOC423240 Neighboring gene tau tubulin kinase 2 Neighboring gene peripherin 2 like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in chromatin organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
codanin-1
Names
congenital dyserythropoietic anemia, type I

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    25355061..25392302 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_421163.8 → XP_421163.6  codanin-1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZBL6

  2. XM_040701909.2 → XP_040557843.1  codanin-1 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZBL6

  3. XM_040701908.2 → XP_040557842.1  codanin-1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZBL6

  4. XM_040701906.2 → XP_040557840.1  codanin-1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZBL6

  5. XM_040701910.2 → XP_040557844.1  codanin-1 isoform X4

    UniProtKB/TrEMBL
    A0A8V0ZBL6
    Related
    ENSGALP00010028313.1, ENSGALT00010047950.1

RNA

  1. XR_005860477.2 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    25321892..25359030 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040673735.2 → XP_040529669.2  codanin-1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZBL6

  2. XM_040673736.2 → XP_040529670.2  codanin-1 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZBL6

  3. XM_040673734.2 → XP_040529668.2  codanin-1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZBL6

  4. XM_040673733.2 → XP_040529667.2  codanin-1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZBL6

  5. XM_040673737.2 → XP_040529671.2  codanin-1 isoform X4

    UniProtKB/TrEMBL
    A0A8V0ZBL6

RNA

  1. XR_005850827.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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