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CG16727 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 42338, updated on 9-Dec-2024

Summary

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Official Symbol
CG16727provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0038719
Locus tag
Dmel_CG16727
See related
AllianceGenome:FB:FBgn0038719
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG16727
Summary
Predicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Orthologous to human SLC22A24 (solute carrier family 22 member 24). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG16727 in Genome Data Viewer
Location:
92A10-92A10; 3-66 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (19613381..19615784)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (15439103..15441506)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene mir-9373 stem loop Neighboring gene subdued Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. SLC22 Transporters in the Fly Renal System Regulate Response to Oxidative Stress In Vivo. Zhang P, et al. Int J Mol Sci, 2021 Dec 14. PMID 34948211, Free PMC Article
  2. Mining gene expression data for pollutants (dioxin, toluene, formaldehyde) and low dose of gamma-irradiation. Moskalev A, et al. PLoS One, 2014. PMID 24475070, Free PMC Article
  3. Evidence for the fixation of gene duplications by positive selection in Drosophila. Cardoso-Moreira M, et al. Genome Res, 2016 Jun. PMID 27197209, Free PMC Article
  4. Drosophila SLC22 Orthologs Related to OATs, OCTs, and OCTNs Regulate Development and Responsiveness to Oxidative Stress. Engelhart DC, et al. Int J Mol Sci, 2020 Mar 15. PMID 32183456, Free PMC Article
  5. Drosophila Regnase-1 RNase is required for mRNA and miRNA profile remodelling during larva-to-adult metamorphosis. Zhu L, et al. RNA Biol, 2019 Oct. PMID 31195914, Free PMC Article

See all (34) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG16727-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    19613381..19615784
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_142561.2 → NP_650818.1  uncharacterized protein Dmel_CG16727 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_650818.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VDV6
    Related
    FBpp0083194
    Conserved Domains (2) summary
    cd06174
    Location:125 → 499
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    TIGR00898
    Location:11 → 509
    2A0119; cation transport protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VDV6 Q9VDV6

Gene LinkOut

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