U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TNFAIP2 TNF alpha induced protein 2 [ Gallus gallus (chicken) ]

Gene ID: 423477, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Symbol
TNFAIP2provided by CGNC
Full Name
TNF alpha induced protein 2provided by CGNC
Primary source
CGNC:8698
See related
Ensembl:ENSGALG00010015698
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See TNFAIP2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
13
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (49643193..49661781)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (49621774..49640388)

Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene protein LBH-like Neighboring gene exocyst complex component 3 like 4 Neighboring gene uncharacterized LOC107053556 Neighboring gene exocyst complex component 3 like Neighboring gene uncharacterized LOC121110863 Neighboring gene small nucleolar RNA SNORA28 Neighboring gene eukaryotic translation initiation factor 5

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNARE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in exocyst localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of exocyst IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
tumor necrosis factor alpha-induced protein 2
Names
tumor necrosis factor, alpha-induced protein 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    49643193..49661781
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015287936.2 → XP_015143422.2  tumor necrosis factor alpha-induced protein 2

    UniProtKB/TrEMBL
    A0A8V0YSZ0
    Related
    ENSGALP00010021830.1, ENSGALT00010037802.1
    Conserved Domains (1) summary
    cl19885
    Location:233 → 716
    Sec6; Exocyst complex component Sec6

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    49621774..49640388
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040671957.1 → XP_040527891.1  tumor necrosis factor alpha-induced protein 2

    UniProtKB/TrEMBL
    A0A8V0YSZ0
    Conserved Domains (1) summary
    cl19885
    Location:233 → 716
    Sec6; Exocyst complex component Sec6
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials