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NABP1 nucleic acid binding protein 1 [ Gallus gallus (chicken) ]

Gene ID: 424046, updated on 17-Aug-2024

Summary

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Symbol
NABP1provided by CGNC
Full Name
nucleic acid binding protein 1provided by CGNC
Primary source
CGNC:5845
See related
Ensembl:ENSGALG00010010786
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
OBFC2A
Orthologs
human mouse all
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Genomic context

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See NABP1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
6
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 7 NC_052538.1 (7743942..7759169)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 7 NC_052579.1 (7667947..7683166)

Chromosome 7 - NC_052538.1Genomic Context describing neighboring genes Neighboring gene myosin IB Neighboring gene uncharacterized LOC121111240 Neighboring gene testis specific serine kinase 6 Neighboring gene uncharacterized LOC107053801 Neighboring gene protein kinase C delta binding protein Neighboring gene transmembrane protein with EGF like and two follistatin like domains 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cell cycle checkpoint signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to ionizing radiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SOSS complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SOSS complex subunit B2
Names
oligonucleotide/oligosaccharide-binding fold containing 2A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052538.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    7743942..7759169
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_421902.8 → XP_421902.2  SOSS complex subunit B2

    UniProtKB/TrEMBL
    R4GHL6
    Related
    ENSGALP00010014532.1, ENSGALT00010025797.1
    Conserved Domains (1) summary
    cd04491
    Location:22 → 99
    SoSSB_OBF; A subfamily of OB folds similar to the OB fold of the crenarchaeote Sulfolobus solfataricus single-stranded (ss) DNA-binding protein (SSoSSB). SSoSSB has a single OB fold, and it physically and functionally interacts with RNA polymerase. In vitro, SSoSSB ...

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052579.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    7667947..7683166
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040675805.2 → XP_040531739.1  SOSS complex subunit B2

    Conserved Domains (1) summary
    cd04491
    Location:22 → 99
    SoSSB_OBF; A subfamily of OB folds similar to the OB fold of the crenarchaeote Sulfolobus solfataricus single-stranded (ss) DNA-binding protein (SSoSSB). SSoSSB has a single OB fold, and it physically and functionally interacts with RNA polymerase. In vitro, SSoSSB ...
Nucleotide Protein Strain
Heading Accession and Version

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