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PLCL1 phospholipase C like 1 [ Gallus gallus (chicken) ]

Gene ID: 424060, updated on 3-Dec-2024

Summary

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Symbol
PLCL1provided by CGNC
Full Name
phospholipase C like 1provided by CGNC
Primary source
CGNC:6148
See related
Ensembl:ENSGALG00010015218
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See PLCL1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
7
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 7 NC_052538.1 (9924680..10111560, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 7 NC_052579.1 (9849950..10036064, complement)

Chromosome 7 - NC_052538.1Genomic Context describing neighboring genes Neighboring gene raftlin family member 2 Neighboring gene boule homolog, RNA binding protein Neighboring gene uncharacterized LOC112532788 Neighboring gene uncharacterized LOC107053804

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inactive phospholipase C-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052538.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    9924680..10111560 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_421916.8 → XP_421916.3  inactive phospholipase C-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YKD3, A0A8V0YRR9, A0A8V0YTH7, A0A8V0YYI0
    Related
    ENSGALP00010021400.1, ENSGALT00010036696.1
    Conserved Domains (4) summary
    cd00275
    Location:719 → 847
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd08597
    Location:396 → 687
    PI-PLCc_PRIP_metazoa; Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein
    cd13364
    Location:114 → 222
    PH_PLC_eta; Phospholipase C-eta (PLC-eta) pleckstrin homology (PH) domain
    cd16222
    Location:242 → 384
    EFh_PRIP1; EF-hand motif found in phospholipase C-related but catalytically inactive protein 1 (PRIP-1)

  2. XM_046943908.1 → XP_046799864.1  inactive phospholipase C-like protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YKD3, A0A8V0YRS4, A0A8V0YYI0
    Related
    ENSGALP00010021399.1, ENSGALT00010036693.1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052579.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    9849950..10036064 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040676067.2 → XP_040532001.1  inactive phospholipase C-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YKD3, A0A8V0YRR9, A0A8V0YTH7, A0A8V0YYI0
    Conserved Domains (4) summary
    cd00275
    Location:719 → 847
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd08597
    Location:396 → 687
    PI-PLCc_PRIP_metazoa; Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein
    cd13364
    Location:114 → 222
    PH_PLC_eta; Phospholipase C-eta (PLC-eta) pleckstrin homology (PH) domain
    cd16222
    Location:242 → 384
    EFh_PRIP1; EF-hand motif found in phospholipase C-related but catalytically inactive protein 1 (PRIP-1)

  2. XM_046922012.1 → XP_046777968.1  inactive phospholipase C-like protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YKD3, A0A8V0YRS4, A0A8V0YYI0
Nucleotide Protein
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