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INO80D INO80 complex subunit D [ Gallus gallus (chicken) ]

Gene ID: 424103, updated on 17-Aug-2024

Summary

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Symbol
INO80Dprovided by CGNC
Full Name
INO80 complex subunit Dprovided by CGNC
Primary source
CGNC:52130
See related
Ensembl:ENSGALG00010025994
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See INO80D in Genome Data Viewer
Location:
chromosome: 7
Exon count:
14
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 7 NC_052538.1 (12215021..12257785)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 7 NC_052579.1 (12136241..12179022)

Chromosome 7 - NC_052538.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORD51 Neighboring gene eukaryotic translation elongation factor 1 beta 2 Neighboring gene NADH:ubiquinone oxidoreductase core subunit S1 Neighboring gene uncharacterized LOC107053808 Neighboring gene neuropilin 2 Neighboring gene par-3 family cell polarity regulator beta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
INO80 complex subunit D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052538.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    12215021..12257785
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015289519.4 → XP_015145005.1  INO80 complex subunit D isoform X1

    UniProtKB/TrEMBL
    A0A1D5P5H5, A0A8V1AA43
    Conserved Domains (1) summary
    pfam13891
    Location:18 → 79
    zf-C3Hc3H; Potential DNA-binding domain

  2. XM_040703925.2 → XP_040559859.1  INO80 complex subunit D isoform X1

    UniProtKB/TrEMBL
    A0A1D5P5H5, A0A8V1AA43
    Related
    ENSGALP00010039135.1, ENSGALT00010063404.1
    Conserved Domains (1) summary
    pfam13891
    Location:18 → 79
    zf-C3Hc3H; Potential DNA-binding domain

  3. XM_015289521.4 → XP_015145007.1  INO80 complex subunit D isoform X1

    UniProtKB/TrEMBL
    A0A1D5P5H5, A0A8V1AA43
    Conserved Domains (1) summary
    pfam13891
    Location:18 → 79
    zf-C3Hc3H; Potential DNA-binding domain

  4. XM_015289522.4 → XP_015145008.1  INO80 complex subunit D isoform X1

    UniProtKB/TrEMBL
    A0A1D5P5H5, A0A8V1AA43
    Conserved Domains (1) summary
    pfam13891
    Location:18 → 79
    zf-C3Hc3H; Potential DNA-binding domain

  5. XM_015289523.4 → XP_015145009.1  INO80 complex subunit D isoform X2

    UniProtKB/TrEMBL
    A0A8V1AA43
    Related
    ENSGALP00010039134.1, ENSGALT00010063403.1
    Conserved Domains (1) summary
    pfam13891
    Location:344 → 408
    zf-C3Hc3H; Potential DNA-binding domain

  6. XM_040703927.2 → XP_040559861.1  INO80 complex subunit D isoform X1

    UniProtKB/TrEMBL
    A0A1D5P5H5, A0A8V1AA43
    Conserved Domains (1) summary
    pfam13891
    Location:18 → 79
    zf-C3Hc3H; Potential DNA-binding domain

  7. XM_015289520.4 → XP_015145006.1  INO80 complex subunit D isoform X1

    UniProtKB/TrEMBL
    A0A1D5P5H5, A0A8V1AA43
    Conserved Domains (1) summary
    pfam13891
    Location:18 → 79
    zf-C3Hc3H; Potential DNA-binding domain

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052579.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    12136241..12179022
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040676205.2 → XP_040532139.1  INO80 complex subunit D isoform X1

    UniProtKB/TrEMBL
    A0A1D5P5H5, A0A8V1AA43
    Conserved Domains (1) summary
    pfam13891
    Location:18 → 79
    zf-C3Hc3H; Potential DNA-binding domain

  2. XM_040676204.2 → XP_040532138.1  INO80 complex subunit D isoform X1

    UniProtKB/TrEMBL
    A0A1D5P5H5, A0A8V1AA43
    Conserved Domains (1) summary
    pfam13891
    Location:18 → 79
    zf-C3Hc3H; Potential DNA-binding domain

  3. XM_040676209.2 → XP_040532143.1  INO80 complex subunit D isoform X1

    UniProtKB/TrEMBL
    A0A1D5P5H5, A0A8V1AA43
    Conserved Domains (1) summary
    pfam13891
    Location:18 → 79
    zf-C3Hc3H; Potential DNA-binding domain

  4. XM_040676210.2 → XP_040532144.1  INO80 complex subunit D isoform X1

    UniProtKB/TrEMBL
    A0A1D5P5H5, A0A8V1AA43
    Conserved Domains (1) summary
    pfam13891
    Location:18 → 79
    zf-C3Hc3H; Potential DNA-binding domain

  5. XM_040676211.2 → XP_040532145.1  INO80 complex subunit D isoform X2

    UniProtKB/TrEMBL
    A0A8V1AA43
    Conserved Domains (1) summary
    pfam13891
    Location:344 → 408
    zf-C3Hc3H; Potential DNA-binding domain

  6. XM_040676208.2 → XP_040532142.1  INO80 complex subunit D isoform X1

    UniProtKB/TrEMBL
    A0A1D5P5H5, A0A8V1AA43
    Conserved Domains (1) summary
    pfam13891
    Location:18 → 79
    zf-C3Hc3H; Potential DNA-binding domain

  7. XM_040676206.2 → XP_040532140.1  INO80 complex subunit D isoform X1

    UniProtKB/TrEMBL
    A0A1D5P5H5, A0A8V1AA43
    Conserved Domains (1) summary
    pfam13891
    Location:18 → 79
    zf-C3Hc3H; Potential DNA-binding domain
Nucleotide Protein Strain
Heading Accession and Version

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