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HTATIP2 HIV-1 Tat interactive protein 2 [ Gallus gallus (chicken) ]

Gene ID: 424363, updated on 17-Aug-2024

Summary

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Symbol
HTATIP2provided by CGNC
Full Name
HIV-1 Tat interactive protein 2provided by CGNC
Primary source
CGNC:1858
See related
Ensembl:ENSGALG00010012869
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See HTATIP2 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
5
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 8 NC_052539.1 (3703396..3706028, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 8 NC_052580.1 (3714832..3717463, complement)

Chromosome 8 - NC_052539.1Genomic Context describing neighboring genes Neighboring gene regulator of G-protein signaling 4 Neighboring gene regulator of G-protein signaling 18 Neighboring gene uncharacterized LOC121111356 Neighboring gene 1-phosphatidylinositol phosphodiesterase-like Neighboring gene uncharacterized LOC121111355 Neighboring gene regulator of G-protein signaling 5 Neighboring gene selectin P Neighboring gene activating transcription factor 6 beta Neighboring gene uncharacterized LOC121111357

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
oxidoreductase HTATIP2
Names
HIV-1 Tat interactive protein 2, 30kDa
XP_015145883.2
XP_040533213.1
XP_040533214.1
XP_422206.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052539.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    3703396..3706028 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015290397.4 → XP_015145883.2  oxidoreductase HTATIP2 isoform X1

    Conserved Domains (1) summary
    cl21454
    Location:9 → 136
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

  2. XM_422206.8 → XP_422206.1  oxidoreductase HTATIP2 isoform X2

    UniProtKB/TrEMBL
    A0A1L1RLC7
    Related
    ENSGALP00010017914.1, ENSGALT00010030869.1
    Conserved Domains (1) summary
    cd05250
    Location:9 → 220
    CC3_like_SDR_a; CC3(TIP30)-like, atypical (a) SDRs

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052580.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    3714832..3717463 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040677279.2 → XP_040533213.1  oxidoreductase HTATIP2 isoform X1

    Conserved Domains (1) summary
    cl21454
    Location:9 → 136
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

  2. XM_040677280.2 → XP_040533214.1  oxidoreductase HTATIP2 isoform X2

    UniProtKB/TrEMBL
    A0A1L1RLC7
    Conserved Domains (1) summary
    cd05250
    Location:9 → 220
    CC3_like_SDR_a; CC3(TIP30)-like, atypical (a) SDRs
Nucleotide Protein
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