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STX10 syntaxin 10 [ Gallus gallus (chicken) ]

Gene ID: 424413, updated on 17-Aug-2024

Summary

Symbol
STX10provided by CGNC
Full Name
syntaxin 10provided by CGNC
Primary source
CGNC:2841
See related
Ensembl:ENSGALG00010009765
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
STX6; syntaxin-6
Orthologs
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Genomic context

See STX10 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
9
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 8 NC_052539.1 (5810218..5824228)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 8 NC_052580.1 (5822218..5836233)

Chromosome 8 - NC_052539.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112532925 Neighboring gene uncharacterized LOC107053937 Neighboring gene immediate early response 5 Neighboring gene KIAA1614 Neighboring gene xenotropic and polytropic retrovirus receptor 1

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNAP receptor activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in Golgi vesicle transport IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
syntaxin-6
Names
syntaxin 6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001006531.2NP_001006531.1  syntaxin-6

    See identical proteins and their annotated locations for NP_001006531.1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000237
    UniProtKB/Swiss-Prot
    Q5ZL19
    UniProtKB/TrEMBL
    A0A8V0Y535
    Related
    ENSGALP00010013484.1, ENSGALT00010023331.1
    Conserved Domains (2) summary
    cd15851
    Location:165230
    SNARE_Syntaxin6; SNARE motif of syntaxin 6
    pfam09177
    Location:13103
    Syntaxin-6_N; Syntaxin 6, N-terminal

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052539.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    5810218..5824228
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_005861807.2 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052580.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    5822218..5836233
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_006935392.1 RNA Sequence