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OLFM3 olfactomedin 3 [ Gallus gallus (chicken) ]

Gene ID: 424461, updated on 17-Aug-2024

Summary

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Symbol
OLFM3provided by CGNC
Full Name
olfactomedin 3provided by CGNC
Primary source
CGNC:3872
See related
Ensembl:ENSGALG00010023421
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See OLFM3 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
6
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 8 NC_052539.1 (11206224..11260847)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 8 NC_052580.1 (11222260..11276869)

Chromosome 8 - NC_052539.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107053980 Neighboring gene uncharacterized LOC121111394 Neighboring gene uncharacterized LOC124416949 Neighboring gene uncharacterized LOC119771270 Neighboring gene uncharacterized LOC121111396 Neighboring gene sphingosine-1-phosphate receptor 1 Neighboring gene microRNA 1610

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
noelin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052539.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    11206224..11260847
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003641696.6 → XP_003641744.1  noelin-3 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZT31
    Related
    ENSGALP00010034723.1, ENSGALT00010057087.1
    Conserved Domains (3) summary
    PRK03918
    Location:61 → 197
    PRK03918; DNA double-strand break repair ATPase Rad50
    pfam02191
    Location:202 → 446
    OLF; Olfactomedin-like domain
    pfam12308
    Location:26 → 125
    Noelin-1; Neurogenesis glycoprotein

  2. XM_040704933.2 → XP_040560867.1  noelin-3 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZT31
    Conserved Domains (2) summary
    pfam02191
    Location:150 → 394
    OLF; Olfactomedin-like domain
    pfam12308
    Location:26 → 117
    Noelin-1; Neurogenesis glycoprotein

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052580.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    11222260..11276869
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040677659.2 → XP_040533593.1  noelin-3 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZT31
    Conserved Domains (3) summary
    PRK03918
    Location:61 → 197
    PRK03918; DNA double-strand break repair ATPase Rad50
    pfam02191
    Location:202 → 446
    OLF; Olfactomedin-like domain
    pfam12308
    Location:26 → 125
    Noelin-1; Neurogenesis glycoprotein

  2. XM_040677660.2 → XP_040533594.1  noelin-3 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZT31
    Conserved Domains (2) summary
    pfam02191
    Location:150 → 394
    OLF; Olfactomedin-like domain
    pfam12308
    Location:26 → 117
    Noelin-1; Neurogenesis glycoprotein
Nucleotide Protein Strain
Heading Accession and Version

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