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CCDC18 coiled-coil domain containing 18 [ Gallus gallus (chicken) ]

Gene ID: 424497, updated on 3-Dec-2024

Summary

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Symbol
CCDC18provided by CGNC
Full Name
coiled-coil domain containing 18provided by CGNC
Primary source
CGNC:4396
See related
Ensembl:ENSGALG00010021705
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See CCDC18 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
30
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 8 NC_052539.1 (13687058..13714898, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 8 NC_052580.1 (13693735..13721559, complement)

Chromosome 8 - NC_052539.1Genomic Context describing neighboring genes Neighboring gene down-regulator of transcription 1 Neighboring gene retinol dehydrogenase 8 like 2 Neighboring gene transmembrane p24 trafficking protein 5 Neighboring gene metal response element binding transcription factor 2 Neighboring gene uncharacterized LOC112532879 Neighboring gene family with sequence similarity 69 member A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
coiled-coil domain-containing protein 18
NP_001238963.2
XP_015146121.2
XP_015146122.2
XP_040560521.1
XP_040560522.1
XP_046778608.1
XP_046778609.1
XP_046778610.1
XP_046778611.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001252034.2 → NP_001238963.2  coiled-coil domain-containing protein 18

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000239
    UniProtKB/TrEMBL
    A0A8V0ZJU8
    Related
    ENSGALP00010031661.1, ENSGALT00010052754.1
    Conserved Domains (1) summary
    COG1196
    Location:507 → 1293
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052539.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    13687058..13714898 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040704588.2 → XP_040560522.1  coiled-coil domain-containing protein 18 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZJU8
    Conserved Domains (2) summary
    COG1196
    Location:562 → 1205
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:159 → 917
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  2. XM_040704587.2 → XP_040560521.1  coiled-coil domain-containing protein 18 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZJU8
    Conserved Domains (2) summary
    COG1196
    Location:553 → 1250
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:159 → 930
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  3. XM_015290636.4 → XP_015146122.2  coiled-coil domain-containing protein 18 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZJU8
    Conserved Domains (2) summary
    COG1196
    Location:489 → 1186
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:95 → 866
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  4. XM_015290635.4 → XP_015146121.2  coiled-coil domain-containing protein 18 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZJU8
    Conserved Domains (2) summary
    COG1196
    Location:489 → 1186
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:95 → 866
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052580.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    13693735..13721559 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046922653.1 → XP_046778609.1  coiled-coil domain-containing protein 18 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZJU8

  2. XM_046922652.1 → XP_046778608.1  coiled-coil domain-containing protein 18 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZJU8

  3. XM_046922655.1 → XP_046778611.1  coiled-coil domain-containing protein 18 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZJU8

  4. XM_046922654.1 → XP_046778610.1  coiled-coil domain-containing protein 18 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZJU8
Nucleotide Protein Strain
Heading Accession and Version

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