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dmrt93B doublesex-Mab related 93B [ Drosophila melanogaster (fruit fly) ]

Gene ID: 42494, updated on 4-Jan-2025

Summary

Official Symbol
dmrt93Bprovided by FlyBase
Official Full Name
doublesex-Mab related 93Bprovided by FlyBase
Primary source
FLYBASE:FBgn0038851
Locus tag
Dmel_CG5737
See related
AllianceGenome:FB:FBgn0038851
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG5737; Dmel\CG5737; dmrt93b
Summary
Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II and sex differentiation. Predicted to be active in nucleus. Is expressed in embryonic frontal ganglion. Used to study primary ovarian insufficiency. Orthologous to human DMRT3 (doublesex and mab-3 related transcription factor 3). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See dmrt93B in Genome Data Viewer
Location:
93B10-93B10; 3-70 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (21074007..21076798)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (16899729..16902520)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene cortactin Neighboring gene Annexin B9 Neighboring gene rudimentary-like Neighboring gene Hematopoietically expressed homeobox Neighboring gene Rho GTPase activating protein at 93B Neighboring gene long non-coding RNA:CR44178

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in regulation of transcription by RNA polymerase II ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in sex differentiation IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
doublesex-Mab related 93B
Names
CG5737-PA
dmrt93B-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    21074007..21076798
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_079704.1NP_524428.1  doublesex-Mab related 93B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_524428.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VDF1
    Related
    FBpp0083410, FBtr0084007
    Conserved Domains (2) summary
    cd14370
    Location:176214
    CUE_DMA; CUE-like DMA domain found in the DM domain gene family encodes putative transcription factors DMRTA1, DMRTA2 and DMRTA3
    pfam00751
    Location:3985
    DM; DM DNA binding domain