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CG6678 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 42581, updated on 9-Dec-2024

Summary

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Official Symbol
CG6678provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0038917
Locus tag
Dmel_CG6678
See related
AllianceGenome:FB:FBgn0038917
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG6678
Summary
Is expressed in organism. Orthologous to human RCCD1 (RCC1 domain containing 1). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG6678 in Genome Data Viewer
Location:
93F14-93F14; 3-73 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (21887029..21907182)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (17712751..17732904)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR45046 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene female-specific independent of transformer Neighboring gene dead end Neighboring gene uncharacterized protein Neighboring gene Quiescin sulfhydryl oxidase 3 Neighboring gene Quiescin sulfhydryl oxidase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Conversion of plasma membrane topology during epithelial tube connection requires Arf-like 3 small GTPase in Drosophila. Kakihara K, et al. Mech Dev, 2008 Mar-Apr. PMID 18083504
  2. The Drosophila Dead end Arf-like3 GTPase controls vesicle trafficking during tracheal fusion cell morphogenesis. Jiang L, et al. Dev Biol, 2007 Nov 15. PMID 17919535, Free PMC Article
  3. Early-life nutrition interacts with developmental genes to shape the brain and sleep behavior in Drosophila melanogaster. Olivares GH, et al. Sleep, 2023 Apr 12. PMID 36718043
  4. Telomeric position effect--a third silencing mechanism in eukaryotes. Doheny JG, et al. PLoS One, 2008. PMID 19057646, Free PMC Article
  5. Latitudinal clines in gene expression and cis-regulatory element variation in Drosophila melanogaster. Juneja P, et al. BMC Genomics, 2016 Nov 28. PMID 27894253, Free PMC Article

See all (28) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
uncharacterized protein
Names
CG6678-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    21887029..21907182
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_142739.3 → NP_650996.1  uncharacterized protein Dmel_CG6678 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_650996.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q95SZ0, Q9VD63
    Related
    FBpp0083546
    Conserved Domains (3) summary
    COG5184
    Location:78 → 371
    ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
    pfam00415
    Location:192 → 241
    RCC1; Regulator of chromosome condensation (RCC1) repeat
    pfam13540
    Location:228 → 257
    RCC1_2; Regulator of chromosome condensation (RCC1) repeat
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VD63 Q9VD63

Gene LinkOut

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