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ANKRD12 ankyrin repeat domain 12 [ Gallus gallus (chicken) ]

Gene ID: 425900, updated on 17-Aug-2024

Summary

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Official Symbol
ANKRD12provided by CGNC
Official Full Name
ankyrin repeat domain 12provided by CGNC
Primary source
CGNC:6363
See related
Ensembl:ENSGALG00010001845
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See ANKRD12 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
13
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (98204284..98267118, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (98263084..98325912, complement)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121109929 Neighboring gene ralA binding protein 1 Neighboring gene twisted gastrulation BMP signaling modulator 1 Neighboring gene uncharacterized LOC112531833 Neighboring gene NADH:ubiquinone oxidoreductase core subunit V2 Neighboring gene uncharacterized LOC101751800

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome analysis for the chicken based on 19,626 finished cDNA sequences and 485,337 expressed sequence tags. Hubbard SJ, et al. Genome Res, 2005 Jan. PMID 15590942, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat domain-containing protein 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    98204284..98267118 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015282496.4 → XP_015137982.3  ankyrin repeat domain-containing protein 12

    UniProtKB/TrEMBL
    A0A8V0X3R7, A0A8V0XAC9
    Related
    ENSGALP00010002493.1, ENSGALT00010004196.1
    Conserved Domains (3) summary
    PTZ00121
    Location:655 → 1120
    PTZ00121; MAEBL; Provisional
    COG0666
    Location:105 → 278
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:161 → 192
    ANK; ANK repeat [structural motif]

  2. XM_040687773.2 → XP_040543707.1  ankyrin repeat domain-containing protein 12

    UniProtKB/TrEMBL
    A0A8V0X3R7, A0A8V0XAC9
    Conserved Domains (3) summary
    PTZ00121
    Location:655 → 1120
    PTZ00121; MAEBL; Provisional
    COG0666
    Location:105 → 278
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:161 → 192
    ANK; ANK repeat [structural motif]

RNA

  1. XR_005855194.2 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    98263084..98325912 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040664891.2 → XP_040520825.1  ankyrin repeat domain-containing protein 12

    UniProtKB/TrEMBL
    A0A8V0X3R7, A0A8V0XAC9
    Conserved Domains (3) summary
    PTZ00121
    Location:655 → 1120
    PTZ00121; MAEBL; Provisional
    COG0666
    Location:105 → 278
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:161 → 192
    ANK; ANK repeat [structural motif]

  2. XM_040664892.2 → XP_040520826.1  ankyrin repeat domain-containing protein 12

    UniProtKB/TrEMBL
    A0A8V0X3R7, A0A8V0XAC9
    Conserved Domains (3) summary
    PTZ00121
    Location:655 → 1120
    PTZ00121; MAEBL; Provisional
    COG0666
    Location:105 → 278
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:161 → 192
    ANK; ANK repeat [structural motif]

RNA

  1. XR_005847063.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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