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RHNO1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 [ Gallus gallus (chicken) ]

Gene ID: 426083, updated on 17-Aug-2024

Summary

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Official Symbol
RHNO1provided by CGNC
Official Full Name
RAD9-HUS1-RAD1 interacting nuclear orphan 1provided by CGNC
Primary source
CGNC:10096
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
RHINO; C12ORF32; HKMT1188; C1H12orf32
Orthologs
human mouse all
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Genomic context

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See RHNO1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (75587245..75591465)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (75823789..75827979, complement)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene tetraspanin 9 Neighboring gene uncharacterized LOC124417652 Neighboring gene TEA domain transcription factor 4 Neighboring gene uncharacterized LOC124417656 Neighboring gene uncharacterized LOC121109408 Neighboring gene forkhead box M1 Neighboring gene TUB like protein 3 Neighboring gene uncharacterized LOC107054374

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in DNA damage checkpoint signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to ionizing radiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in recombinational repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chromosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RAD9, HUS1, RAD1-interacting nuclear orphan protein 1
Names
Rad9, Rad1, Hus1 interacting nuclear orphan
rAD9, RAD1, HUS1-interacting nuclear orphan protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001006563.2 → NP_001006563.1  RAD9, HUS1, RAD1-interacting nuclear orphan protein 1

    See identical proteins and their annotated locations for NP_001006563.1

    Status: PROVISIONAL

    Source sequence(s)
    AJ721088
    UniProtKB/TrEMBL
    Q5ZHP6
    Conserved Domains (1) summary
    pfam15319
    Location:1 → 258
    RHINO; RAD9, RAD1, HUS1-interacting nuclear orphan protein

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    75587245..75591465
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040701004.2 → XP_040556938.1  RAD9, HUS1, RAD1-interacting nuclear orphan protein 1 isoform X1

    UniProtKB/TrEMBL
    Q5ZHP6
    Conserved Domains (1) summary
    pfam15319
    Location:1 → 258
    RHINO; RAD9, RAD1, HUS1-interacting nuclear orphan protein

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    75823789..75827979 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046908509.1 → XP_046764465.1  RAD9, HUS1, RAD1-interacting nuclear orphan protein 1 isoform X1

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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