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PLEKHO1 pleckstrin homology domain containing O1 [ Gallus gallus (chicken) ]

Gene ID: 426108, updated on 3-Dec-2024

Summary

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Symbol
PLEKHO1provided by CGNC
Full Name
pleckstrin homology domain containing O1provided by CGNC
Primary source
CGNC:10118
See related
Ensembl:ENSGALG00010028502
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See PLEKHO1 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
7
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 25 NC_052556.1 (196073..211604)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 25 NC_052597.1 (504463..520019)

Chromosome 25 - NC_052556.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107055083 Neighboring gene uncharacterized LOC121107550 Neighboring gene vacuolar protein sorting 45 homolog Neighboring gene acidic nuclear phosphoprotein 32 family member E Neighboring gene lamin A/C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of myoblast fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in muscle cell projection membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ruffle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pleckstrin homology domain-containing family O member 1
Names
PH domain-containing family O member 1
casein kinase-2 interacting protein-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001031356.2 → NP_001026527.2  pleckstrin homology domain-containing family O member 1 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000344
    UniProtKB/Swiss-Prot
    Q5F3C8
    UniProtKB/TrEMBL
    A0A1D5P4V8, A0A1L1RN45
    Related
    ENSGALP00010042455.1, ENSGALT00010069013.1
    Conserved Domains (1) summary
    cd13317
    Location:17 → 126
    PH_PLEKHO1_PLEKHO2; Pleckstrin homology domain-containing family O Pleckstrin homology domain

  2. NM_001397383.1 → NP_001384312.1  pleckstrin homology domain-containing family O member 1 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000344
    UniProtKB/Swiss-Prot
    Q5F3C8
    UniProtKB/TrEMBL
    A0A1D5P4V8, A0A1L1RN45
    Conserved Domains (1) summary
    cd13317
    Location:17 → 126
    PH_PLEKHO1_PLEKHO2; Pleckstrin homology domain-containing family O Pleckstrin homology domain

  3. NM_001397384.1 → NP_001384313.1  pleckstrin homology domain-containing family O member 1 isoform 2

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000344
    UniProtKB/Swiss-Prot
    Q5F3C8
    Conserved Domains (1) summary
    cd13317
    Location:14 → 123
    PH_PLEKHO1_PLEKHO2; Pleckstrin homology domain-containing family O Pleckstrin homology domain

  4. NM_001397385.1 → NP_001384314.1  pleckstrin homology domain-containing family O member 1 isoform 2

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000344
    UniProtKB/Swiss-Prot
    Q5F3C8
    Conserved Domains (1) summary
    cd13317
    Location:14 → 123
    PH_PLEKHO1_PLEKHO2; Pleckstrin homology domain-containing family O Pleckstrin homology domain

  5. NM_001397386.1 → NP_001384315.1  pleckstrin homology domain-containing family O member 1 isoform 2

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000344
    UniProtKB/Swiss-Prot
    Q5F3C8
    Conserved Domains (1) summary
    cd13317
    Location:14 → 123
    PH_PLEKHO1_PLEKHO2; Pleckstrin homology domain-containing family O Pleckstrin homology domain

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052556.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    196073..211604
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040652357.2 → XP_040508291.1  pleckstrin homology domain-containing family O member 1 isoform X1

    UniProtKB/Swiss-Prot
    Q5F3C8
    UniProtKB/TrEMBL
    A0A1D5P4V8, A0A1L1RN45
    Conserved Domains (1) summary
    cd13317
    Location:17 → 126
    PH_PLEKHO1_PLEKHO2; Pleckstrin homology domain-containing family O Pleckstrin homology domain

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052597.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    504463..520019
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046932618.1 → XP_046788574.1  pleckstrin homology domain-containing family O member 1 isoform X1

    UniProtKB/Swiss-Prot
    Q5F3C8
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5F3C8.1 GenPept UniProtKB/Swiss-Prot:Q5F3C8

Gene LinkOut

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Molecular Biology Databases
Research Materials