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LRRC27 leucine rich repeat containing 27 [ Gallus gallus (chicken) ]

Gene ID: 426464, updated on 17-Aug-2024

Summary

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Symbol
LRRC27provided by CGNC
Full Name
leucine rich repeat containing 27provided by CGNC
Primary source
CGNC:10613
See related
Ensembl:ENSGALG00010023118
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
LRDD; PIDD; PIDD1
Orthologs
human mouse all
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Genomic context

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See LRRC27 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
16
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (15383316..15398460)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (15353518..15368672)

Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene EF-hand calcium binding domain 4B Neighboring gene patatin like phospholipase domain containing 2 Neighboring gene small nucleolar RNA SNORA52 Neighboring gene ribosomal protein lateral stalk subunit P2 Neighboring gene solute carrier family 25 member 22 Neighboring gene microRNA 1663 Neighboring gene uncharacterized LOC121113257 Neighboring gene interferon regulatory factor 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA damage response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
p53-induced death domain-containing protein 1
Names
leucine-rich repeats and death domain containing
p53-induced death domain protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    15383316..15398460
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004941462.5 → XP_004941519.4  p53-induced death domain-containing protein 1

    UniProtKB/TrEMBL
    A0A8V0ZUI1
    Related
    ENSGALP00010034113.1, ENSGALT00010056345.1
    Conserved Domains (5) summary
    COG4886
    Location:101 → 265
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    cd08779
    Location:780 → 865
    Death_PIDD; Death Domain of p53-induced protein with a death domain
    sd00033
    Location:85 → 119
    LRR_RI; leucine-rich repeat [structural motif]
    cl02517
    Location:316 → 411
    ZU5; ZU5 domain
    cl39061
    Location:603 → 659
    OTCace; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    15353518..15368672
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040673099.2 → XP_040529033.1  p53-induced death domain-containing protein 1

    Conserved Domains (5) summary
    COG4886
    Location:101 → 265
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    cd08779
    Location:780 → 865
    Death_PIDD; Death Domain of p53-induced protein with a death domain
    sd00033
    Location:60 → 84
    LRR_RI; leucine-rich repeat [structural motif]
    cl02517
    Location:316 → 411
    ZU5; ZU5 domain
    cl39061
    Location:603 → 659
    OTCace; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
Nucleotide Protein Strain
Heading Accession and Version

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