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HECTD4 HECT domain containing E3 ubiquitin protein ligase 4 [ Gallus gallus (chicken) ]

Gene ID: 426582, updated on 17-Aug-2024

Summary

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Official Symbol
HECTD4provided by CGNC
Official Full Name
HECT domain containing E3 ubiquitin protein ligase 4provided by CGNC
Primary source
CGNC:52833
See related
Ensembl:ENSGALG00010025980
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
POTAGE; C12orf51; C15H12orf51
Orthologs
human mouse all
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Genomic context

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See HECTD4 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
76
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 15 NC_052546.1 (6319330..6386159, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 15 NC_052587.1 (6330066..6396815, complement)

Chromosome 15 - NC_052546.1Genomic Context describing neighboring genes Neighboring gene N(alpha)-acetyltransferase 25, NatB auxiliary subunit Neighboring gene TRAF-type zinc finger domain containing 1 Neighboring gene ribosomal protein L6 Neighboring gene protein tyrosine phosphatase non-receptor type 11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable E3 ubiquitin-protein ligase HECTD4; LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase HECTD4
Names
AF-1 specific protein phosphatase
HECT domain-containing protein 4
probable E3 ubiquitin-protein ligase C12orf51
transmembrane protein C12orf51
XP_040504368.1
XP_040540509.1
XP_040540510.1
XP_040540511.1
XP_040540512.1
XP_040540513.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052546.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    6319330..6386159 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040648434.2 → XP_040504368.1  LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase HECTD4 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZZS1
    Related
    ENSGALP00010039111.1, ENSGALT00010063370.1
    Conserved Domains (2) summary
    cd13735
    Location:2402 → 2557
    SPRY_HECT_like; SPRY domain in HECT E3
    cl27008
    Location:4020 → 4414
    HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052587.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    6330066..6396815 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040684577.2 → XP_040540511.1  probable E3 ubiquitin-protein ligase HECTD4 isoform X4

    UniProtKB/TrEMBL
    A0A8V0ZZS1
    Conserved Domains (2) summary
    cd13735
    Location:2409 → 2564
    SPRY_HECT_like; SPRY domain in HECT E3
    cl27008
    Location:4027 → 4421
    HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...

  2. XM_040684579.2 → XP_040540513.1  probable E3 ubiquitin-protein ligase HECTD4 isoform X5

    UniProtKB/TrEMBL
    A0A8V0ZZS1
    Conserved Domains (2) summary
    cd13735
    Location:2400 → 2555
    SPRY_HECT_like; SPRY domain in HECT E3
    cl27008
    Location:4018 → 4412
    HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...

  3. XM_040684576.2 → XP_040540510.1  probable E3 ubiquitin-protein ligase HECTD4 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZZS1
    Conserved Domains (2) summary
    cd13735
    Location:2409 → 2564
    SPRY_HECT_like; SPRY domain in HECT E3
    cl27008
    Location:4027 → 4421
    HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...

  4. XM_040684578.2 → XP_040540512.1  probable E3 ubiquitin-protein ligase HECTD4 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZZS1
    Conserved Domains (2) summary
    cd13735
    Location:2402 → 2557
    SPRY_HECT_like; SPRY domain in HECT E3
    cl27008
    Location:4020 → 4414
    HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...

  5. XM_040684575.2 → XP_040540509.1  probable E3 ubiquitin-protein ligase HECTD4 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZZS1
    Conserved Domains (2) summary
    cd13735
    Location:2411 → 2566
    SPRY_HECT_like; SPRY domain in HECT E3
    cl27008
    Location:4029 → 4423
    HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
Nucleotide Protein Strain
Heading Accession and Version

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