TRIM36 tripartite motif containing 36 [Gallus gallus (chicken)] - Gene

Summary

Official Symbol: TRIM36provided by CGNC
Official Full Name: tripartite motif containing 36provided by CGNC
Primary source: CGNC:6210
See related: Ensembl:ENSGALG00010001145
Gene type: protein coding
RefSeq status: MODEL
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs: human mouse all
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Genomic context

Location:: chromosome: Z

Exon count:: 12

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	Z	NC_052572.1 (83455399..83481856, complement)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	Z	NC_059536.1 (83455399..83481856, complement)

Chromosome Z - NC_052572.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables protein binding	IEA Inferred from Electronic Annotation more info	PubMed
enables zinc ion binding	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: E3 ubiquitin-protein ligase TRIM36

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Range

83455399..83481856 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_046905860.1 → XP_046761816.1 E3 ubiquitin-protein ligase TRIM36 isoform X3

UniProtKB/TrEMBL

A0A8V0X6V3
XM_015280832.4 → XP_015136318.3 E3 ubiquitin-protein ligase TRIM36 isoform X2

UniProtKB/TrEMBL

A0A8V0X6V3
XM_046905859.1 → XP_046761815.1 E3 ubiquitin-protein ligase TRIM36 isoform X1

UniProtKB/TrEMBL

A0A8V0X6V3
XM_040656166.2 → XP_040512100.1 E3 ubiquitin-protein ligase TRIM36 isoform X5

UniProtKB/TrEMBL

A0A8V0X6V3

Related

ENSGALP00010001154.1, ENSGALT00010002604.1

Conserved Domains (6) summary

smart00502
Location:244 → 368

BBC; B-Box C-terminal domain

cd00063
Location:419 → 497

FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

cd16756
Location:16 → 113

RING-HC_TRIM36; RING finger, HC subclass, found in tripartite motif-containing protein 36 (TRIM36) and similar proteins

cd19778
Location:198 → 242

Bbox2_TRIM36_C-I; B-box-type 2 zinc finger found in tripartite motif-containing protein 36 (TRIM36) and similar proteins

cl00034
Location:144 → 192

Bbox_SF; B-box-type zinc finger superfamily

cl02614
Location:505 → 713

SPRY; SPRY domain
XM_040656164.2 → XP_040512098.1 E3 ubiquitin-protein ligase TRIM36 isoform X4

UniProtKB/TrEMBL

A0A8V0X6V3, A0A8V0X9I0

Related

ENSGALP00010001153.1, ENSGALT00010002603.1

Conserved Domains (6) summary

smart00502
Location:254 → 378

BBC; B-Box C-terminal domain

cd00063
Location:429 → 507

FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

cd16756
Location:16 → 123

RING-HC_TRIM36; RING finger, HC subclass, found in tripartite motif-containing protein 36 (TRIM36) and similar proteins

cd19778
Location:208 → 252

Bbox2_TRIM36_C-I; B-box-type 2 zinc finger found in tripartite motif-containing protein 36 (TRIM36) and similar proteins

cl00034
Location:154 → 202

Bbox_SF; B-box-type zinc finger superfamily

cl02614
Location:515 → 723

SPRY; SPRY domain

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Range

83455399..83481856 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_046936163.1 → XP_046792119.1 E3 ubiquitin-protein ligase TRIM36 isoform X3

UniProtKB/TrEMBL

A0A8V0X6V3
XM_046936162.1 → XP_046792118.1 E3 ubiquitin-protein ligase TRIM36 isoform X2

UniProtKB/TrEMBL

A0A8V0X6V3
XM_046936161.1 → XP_046792117.1 E3 ubiquitin-protein ligase TRIM36 isoform X1

UniProtKB/TrEMBL

A0A8V0X6V3
XM_046936165.1 → XP_046792121.1 E3 ubiquitin-protein ligase TRIM36 isoform X5

UniProtKB/TrEMBL

A0A8V0X6V3
XM_046936164.1 → XP_046792120.1 E3 ubiquitin-protein ligase TRIM36 isoform X4

UniProtKB/TrEMBL

A0A8V0X6V3, A0A8V0X9I0