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SECISBP2 SECIS binding protein 2 [ Gallus gallus (chicken) ]

Gene ID: 426815, updated on 3-Dec-2024

Summary

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Symbol
SECISBP2provided by CGNC
Full Name
SECIS binding protein 2provided by CGNC
Primary source
CGNC:8126
See related
Ensembl:ENSGALG00010009153
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See SECISBP2 in Genome Data Viewer
Location:
chromosome: Z
Exon count:
18
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) Z NC_052572.1 (44168664..44199161)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) Z NC_059536.1 (44168664..44199161)

Chromosome Z - NC_052572.1Genomic Context describing neighboring genes Neighboring gene SHC adaptor protein 3 Neighboring gene uncharacterized LOC121108567 Neighboring gene CDC28 protein kinase regulatory subunit 2 Neighboring gene semaphorin 4D Neighboring gene uncharacterized LOC121108568 Neighboring gene growth arrest and DNA damage inducible gamma

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA 3'-UTR binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribonucleoprotein complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables selenocysteine insertion sequence binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in selenocysteine incorporation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
selenocysteine insertion sequence-binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    44168664..44199161
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040656345.2 → XP_040512279.1  selenocysteine insertion sequence-binding protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y0M8

  2. XM_040656348.2 → XP_040512282.1  selenocysteine insertion sequence-binding protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A8V0Y0M8

  3. XM_040656346.2 → XP_040512280.1  selenocysteine insertion sequence-binding protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0Y0M8, A0A8V0Y2G2
    Related
    ENSGALP00010012506.1, ENSGALT00010021852.1

  4. XM_040656349.2 → XP_040512283.1  selenocysteine insertion sequence-binding protein 2 isoform X5

    UniProtKB/TrEMBL
    A0A8V0Y0M8

  5. XM_040656350.2 → XP_040512284.1  selenocysteine insertion sequence-binding protein 2 isoform X6

    UniProtKB/TrEMBL
    A0A8V0Y0M8

  6. XM_040656347.2 → XP_040512281.1  selenocysteine insertion sequence-binding protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A8V0Y0M8

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    44168664..44199161
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046936827.1 → XP_046792783.1  selenocysteine insertion sequence-binding protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y0M8

  2. XM_046936830.1 → XP_046792786.1  selenocysteine insertion sequence-binding protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A8V0Y0M8

  3. XM_046936828.1 → XP_046792784.1  selenocysteine insertion sequence-binding protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0Y0M8, A0A8V0Y2G2

  4. XM_046936831.1 → XP_046792787.1  selenocysteine insertion sequence-binding protein 2 isoform X5

    UniProtKB/TrEMBL
    A0A8V0Y0M8

  5. XM_046936832.1 → XP_046792788.1  selenocysteine insertion sequence-binding protein 2 isoform X6

    UniProtKB/TrEMBL
    A0A8V0Y0M8

  6. XM_046936829.1 → XP_046792785.1  selenocysteine insertion sequence-binding protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A8V0Y0M8
Nucleotide Protein Strain
Heading Accession and Version

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