U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SLC12A2 solute carrier family 12 member 2 [ Gallus gallus (chicken) ]

Gene ID: 427123, updated on 3-Dec-2024

Summary

Go to the top of the page Help
Symbol
SLC12A2provided by CGNC
Full Name
solute carrier family 12 member 2provided by CGNC
Primary source
CGNC:10891
See related
Ensembl:ENSGALG00010012969
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SLC12A2 in Genome Data Viewer
Location:
chromosome: Z
Exon count:
27
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) Z NC_052572.1 (57500796..57555527)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) Z NC_059536.1 (57500796..57555527)

Chromosome Z - NC_052572.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107052357 Neighboring gene uncharacterized LOC112530573 Neighboring gene uncharacterized LOC121108261 Neighboring gene fibrillin 2 Neighboring gene uncharacterized LOC121108262

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Transcriptome analysis for the chicken based on 19,626 finished cDNA sequences and 485,337 expressed sequence tags. Hubbard SJ, et al. Genome Res, 2005 Jan. PMID 15590942, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ammonium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sodium:potassium:chloride symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell volume homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chloride ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in potassium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in potassium ion import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
solute carrier family 12 member 2
Names
solute carrier family 12 (sodium/potassium/chloride transporter), member 2
solute carrier family 12 (sodium/potassium/chloride transporters), member 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    57500796..57555527
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003643059.6 → XP_003643107.1  solute carrier family 12 member 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YJV8, F1NR57
    Related
    ENSGALP00010018118.1, ENSGALT00010031124.1
    Conserved Domains (4) summary
    TIGR00930
    Location:150 → 1150
    2a30; K-Cl cotransporter
    pfam03522
    Location:734 → 1150
    SLC12; Solute carrier family 12
    pfam08403
    Location:136 → 197
    AA_permease_N; Amino acid permease N-terminal
    cl00456
    Location:242 → 676
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

  2. XM_004949378.5 → XP_004949435.1  solute carrier family 12 member 2 isoform X3

    UniProtKB/TrEMBL
    A0A1D5PPU2, A0A8V0YJV8
    Related
    ENSGALP00010018114.1, ENSGALT00010031120.1
    Conserved Domains (4) summary
    TIGR00930
    Location:150 → 1134
    2a30; K-Cl cotransporter
    pfam03522
    Location:734 → 1134
    SLC12; Solute carrier family 12
    pfam08403
    Location:136 → 197
    AA_permease_N; Amino acid permease N-terminal
    cl00456
    Location:242 → 676
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

  3. XM_004949377.5 → XP_004949434.1  solute carrier family 12 member 2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YJV8
    Conserved Domains (4) summary
    TIGR00930
    Location:150 → 1149
    2a30; K-Cl cotransporter
    pfam03522
    Location:734 → 1149
    SLC12; Solute carrier family 12
    pfam08403
    Location:136 → 197
    AA_permease_N; Amino acid permease N-terminal
    cl00456
    Location:242 → 676
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

  4. XM_040655729.2 → XP_040511663.1  solute carrier family 12 member 2 isoform X4

    UniProtKB/TrEMBL
    A0A8V0YJV8
    Conserved Domains (1) summary
    TIGR00930
    Location:150 → 1133
    2a30; K-Cl cotransporter

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    57500796..57555527
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046936914.1 → XP_046792870.1  solute carrier family 12 member 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YJV8, F1NR57

  2. XM_046936916.1 → XP_046792872.1  solute carrier family 12 member 2 isoform X3

    UniProtKB/TrEMBL
    A0A1D5PPU2, A0A8V0YJV8

  3. XM_046936915.1 → XP_046792871.1  solute carrier family 12 member 2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YJV8

  4. XM_046936917.1 → XP_046792873.1  solute carrier family 12 member 2 isoform X4

    UniProtKB/TrEMBL
    A0A8V0YJV8
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.