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CG13838 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 42719, updated on 18-Sep-2024

Summary

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Official Symbol
CG13838provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0039041
Locus tag
Dmel_CG13838
See related
AllianceGenome:FB:FBgn0039041
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG13838
Orthologs
all
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Genomic context

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See CG13838 in Genome Data Viewer
Location:
94D10-94D10; 3-77 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (23042241..23042669)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (18867963..18868391)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR44226 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Seipin regulates lipid homeostasis by ensuring calcium-dependent mitochondrial metabolism. Ding L, et al. EMBO J, 2018 Sep 3. PMID 30049710, Free PMC Article
  2. Combinatorial binding leads to diverse regulatory responses: Lmd is a tissue-specific modulator of Mef2 activity. Cunha PM, et al. PLoS Genet, 2010 Jul 1. PMID 20617173, Free PMC Article
  3. Wake-up-call, a lin-52 paralogue, and Always early, a lin-9 homologue physically interact, but have opposing functions in regulating testis-specific gene expression. Doggett K, et al. Dev Biol, 2011 Jul 15. PMID 21570388, Free PMC Article
  4. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article
  5. CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans. Wei P, et al. Genome Res, 2020 Jan. PMID 31722958, Free PMC Article

See all (22) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein
Names
CG13838-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    23042241..23042669
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_142855.2 → NP_651112.1  uncharacterized protein Dmel_CG13838 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_651112.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VCS1
    Related
    FBpp0083737
    Conserved Domains (1) summary
    pfam03670
    Location:39 → 73
    UPF0184; uncharacterized protein family (UPF0184)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VCS1 Q9VCS1

Gene LinkOut

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