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ABHD17B abhydrolase domain containing 17B [ Gallus gallus (chicken) ]

Gene ID: 427252, updated on 17-Aug-2024

Summary

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Official Symbol
ABHD17Bprovided by CGNC
Official Full Name
abhydrolase domain containing 17Bprovided by CGNC
Primary source
CGNC:53030
See related
Ensembl:ENSGALG00010014176
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
FAM108B1
Orthologs
human mouse all
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Genomic context

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See ABHD17B in Genome Data Viewer
Location:
chromosome: Z
Exon count:
6
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) Z NC_052572.1 (36214725..36231676, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) Z NC_059536.1 (36214725..36231676, complement)

Chromosome Z - NC_052572.1Genomic Context describing neighboring genes Neighboring gene transient receptor potential cation channel subfamily M member 3 Neighboring gene uncharacterized LOC107052317 Neighboring gene uncharacterized LOC121108347 Neighboring gene cell migration inducing hyaluronidase 2 Neighboring gene chromosome 9 open reading frame 85 Neighboring gene guanine deaminase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables palmitoyl-(protein) hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein depalmitoylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha/beta hydrolase domain-containing protein 17B
Names
abhydrolase domain-containing protein 17B
abhydrolase domain-containing protein FAM108B1
family with sequence similarity 108, member B1
protein ABHD17B
NP_001026594.1
XP_015135774.1
XP_040511480.1
XP_046761327.1
XP_046791055.1
XP_046791056.1
XP_046791057.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001031423.2 → NP_001026594.1  alpha/beta hydrolase domain-containing protein 17B

    See identical proteins and their annotated locations for NP_001026594.1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000094
    UniProtKB/Swiss-Prot
    Q5ZJ01
    Conserved Domains (1) summary
    COG1073
    Location:93 → 285
    FrsA; Fermentation-respiration switch protein FrsA, has esterase activity, DUF1100 family [Signal transduction mechanisms]

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    36214725..36231676 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015280288.4 → XP_015135774.1  alpha/beta hydrolase domain-containing protein 17B isoform X1

    UniProtKB/Swiss-Prot
    Q5ZJ01
    Conserved Domains (1) summary
    COG1073
    Location:93 → 285
    FrsA; Fermentation-respiration switch protein FrsA, has esterase activity, DUF1100 family [Signal transduction mechanisms]

  2. XM_040655546.2 → XP_040511480.1  alpha/beta hydrolase domain-containing protein 17B isoform X1

    UniProtKB/Swiss-Prot
    Q5ZJ01
    Related
    ENSGALP00010020042.1, ENSGALT00010034101.1
    Conserved Domains (1) summary
    COG1073
    Location:93 → 285
    FrsA; Fermentation-respiration switch protein FrsA, has esterase activity, DUF1100 family [Signal transduction mechanisms]

  3. XM_046905371.1 → XP_046761327.1  alpha/beta hydrolase domain-containing protein 17B isoform X1

    UniProtKB/Swiss-Prot
    Q5ZJ01

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    36214725..36231676 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046935099.1 → XP_046791055.1  alpha/beta hydrolase domain-containing protein 17B isoform X1

    UniProtKB/Swiss-Prot
    Q5ZJ01

  2. XM_046935100.1 → XP_046791056.1  alpha/beta hydrolase domain-containing protein 17B isoform X1

    UniProtKB/Swiss-Prot
    Q5ZJ01

  3. XM_046935101.1 → XP_046791057.1  alpha/beta hydrolase domain-containing protein 17B isoform X1

    UniProtKB/Swiss-Prot
    Q5ZJ01
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5ZJ01.1 GenPept UniProtKB/Swiss-Prot:Q5ZJ01

Gene LinkOut

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