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TRABD2A TraB domain containing 2A [ Gallus gallus (chicken) ]

Gene ID: 427288, updated on 3-Dec-2024

Summary

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Official Symbol
TRABD2Aprovided by CGNC
Official Full Name
TraB domain containing 2Aprovided by CGNC
Primary source
CGNC:53039
See related
Ensembl:ENSGALG00010012308
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
CZH2orf89
Orthologs
human all
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Genomic context

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See TRABD2A in Genome Data Viewer
Location:
chromosome: Z
Exon count:
8
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) Z NC_052572.1 (53591749..53676634, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) Z NC_059536.1 (53591749..53676634, complement)

Chromosome Z - NC_052572.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121108291 Neighboring gene uncharacterized LOC121108469 Neighboring gene uncharacterized LOC121108473 Neighboring gene uncharacterized LOC112530641

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
metalloprotease TIKI1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    53591749..53676634 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004949321.5 → XP_004949378.2  metalloprotease TIKI1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YH68
    Conserved Domains (1) summary
    cd14789
    Location:41 → 298
    Tiki; Tiki homology domain antagonizes Wnt function via cleavage of amino-terminal residues

  2. XM_004949322.5 → XP_004949379.1  metalloprotease TIKI1 isoform X3

    Related
    ENSGALP00010017126.1, ENSGALT00010029469.1
    Conserved Domains (1) summary
    pfam01963
    Location:40 → 348
    TraB; TraB family

  3. XM_003643049.6 → XP_003643097.3  metalloprotease TIKI1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YH68, A0A8V0YH73
    Related
    ENSGALP00010017124.1, ENSGALT00010029466.1
    Conserved Domains (1) summary
    cd14789
    Location:41 → 347
    Tiki; Tiki homology domain antagonizes Wnt function via cleavage of amino-terminal residues

  4. XM_040656188.2 → XP_040512122.1  metalloprotease TIKI1 isoform X4

    UniProtKB/TrEMBL
    A0A8V0Y8U9
    Conserved Domains (1) summary
    cd14789
    Location:41 → 347
    Tiki; Tiki homology domain antagonizes Wnt function via cleavage of amino-terminal residues

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    53591749..53676634 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046936005.1 → XP_046791961.1  metalloprotease TIKI1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YH68

  2. XM_046936006.1 → XP_046791962.1  metalloprotease TIKI1 isoform X3

  3. XM_046936004.1 → XP_046791960.1  metalloprotease TIKI1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YH68, A0A8V0YH73

  4. XM_046936007.1 → XP_046791963.1  metalloprotease TIKI1 isoform X4

    UniProtKB/TrEMBL
    A0A8V0Y8U9
Nucleotide Protein
Heading Accession and Version

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