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CG31365 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 42736, updated on 27-Dec-2024

Summary

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Official Symbol
CG31365provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0051365
Locus tag
Dmel_CG31365
See related
AllianceGenome:FB:FBgn0051365
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG4639; Dmel\CG31365
Summary
Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in several structures, including CNS glial cell; antennal anlage; embryonic/larval midgut primordium; ganglia; and head epidermis primordium. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG31365 in Genome Data Viewer
Location:
94E1-94E1; 3-78 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (23123962..23126422, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (18949684..18952144, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Carrier of Wingless Neighboring gene uncharacterized protein Neighboring gene Ras association family member Neighboring gene Centaurin beta 1A Neighboring gene uncharacterized protein Neighboring gene hedgehog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mechanisms of CP190 Interaction with Architectural Proteins in Drosophila Melanogaster. Sabirov M, et al. Int J Mol Sci, 2021 Nov 17. PMID 34830280, Free PMC Article
  2. myoblasts incompetent encodes a zinc finger transcription factor required to specify fusion-competent myoblasts in Drosophila. Ruiz-Gómez M, et al. Development, 2002 Jan. PMID 11782407
  3. Protein interactions on telomeric retrotransposons in Drosophila. Takács S, et al. Int J Biol Sci, 2012. PMID 22949888, Free PMC Article
  4. Structural basis of diversity and homodimerization specificity of zinc-finger-associated domains in Drosophila. Bonchuk A, et al. Nucleic Acids Res, 2021 Feb 26. PMID 33638995, Free PMC Article
  5. Genomic expansion and clustering of ZAD-containing C2H2 zinc-finger genes in Drosophila. Chung HR, et al. EMBO Rep, 2002 Dec. PMID 12446571, Free PMC Article

See all (36) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IBA
Inferred from Biological aspect of Ancestor
more info
  
enables DNA-binding transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables transcription cis-regulatory region binding ISS
Inferred from Sequence or Structural Similarity
more info
  
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription ISS
Inferred from Sequence or Structural Similarity
more info
  
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG31365-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    23123962..23126422 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_170050.2 → NP_732827.1  uncharacterized protein Dmel_CG31365 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_732827.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8T051, Q9VCQ5
    Related
    FBpp0083798
    Conserved Domains (6) summary
    smart00868
    Location:13 → 86
    zf-AD; Zinc-finger associated domain (zf-AD)
    sd00017
    Location:485 → 505
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:497 → 522
    zf-H2C2_2; Zinc-finger double domain
    pfam15909
    Location:454 → 530
    zf-C2H2_8; C2H2-type zinc ribbon
    cl00240
    Location:161 → 222
    RRF; Ribosome recycling factor (RRF). Ribosome recycling factor dissociates the posttermination complex, composed of the ribosome, deacylated tRNA, and mRNA, after termination of translation. Thus ribosomes are "recycled" and ready for another round of ...
    cl23750
    Location:109 → 244
    vATP-synt_E; ATP synthase (E/31 kDa) subunit
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8T051 Q8T051

Gene LinkOut

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