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GEMIN4 gem nuclear organelle associated protein 4 [ Gallus gallus (chicken) ]

Gene ID: 427835, updated on 3-Dec-2024

Summary

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Symbol
GEMIN4provided by CGNC
Full Name
gem nuclear organelle associated protein 4provided by CGNC
Primary source
CGNC:53206
See related
Ensembl:ENSGALG00010029763
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See GEMIN4 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
4
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 19 NC_052550.1 (7414887..7422312)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 19 NC_052591.1 (7151817..7159253)

Chromosome 19 - NC_052550.1Genomic Context describing neighboring genes Neighboring gene mitochondrial rRNA methyltransferase 3 Neighboring gene glyoxalase domain containing 4 Neighboring gene family with sequence similarity 57 member A Neighboring gene VPS53 subunit of GARP complex Neighboring gene uncharacterized LOC107054807 Neighboring gene refilin B Neighboring gene rabphilin 3A-like (without C2 domains)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spliceosomal snRNP assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SMN complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gem-associated protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001282339.1 → NP_001269268.1  gem-associated protein 4

    See identical proteins and their annotated locations for NP_001269268.1

    Status: VALIDATED

    Source sequence(s)
    AJ739491, AJ851571
    UniProtKB/TrEMBL
    Q5F3G4, Q5F3S9
    Related
    ENSGALP00010044692.1, ENSGALT00010072002.1

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052550.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    7414887..7422312
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040650107.2 → XP_040506041.1  gem-associated protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A8V1ANR2

RNA

  1. XR_006931782.1 RNA Sequence

  2. XR_006931781.1 RNA Sequence

  3. XR_006931780.1 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052591.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    7151817..7159253
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046930180.1 → XP_046786136.1  gem-associated protein 4 isoform X2

    UniProtKB/TrEMBL
    Q5F3G4

  2. XM_046930184.1 → XP_046786140.1  gem-associated protein 4 isoform X2

    UniProtKB/TrEMBL
    Q5F3G4

  3. XM_046930181.1 → XP_046786137.1  gem-associated protein 4 isoform X2

    UniProtKB/TrEMBL
    Q5F3G4

  4. XM_046930182.1 → XP_046786138.1  gem-associated protein 4 isoform X2

    UniProtKB/TrEMBL
    Q5F3G4

  5. XM_046930185.1 → XP_046786141.1  gem-associated protein 4 isoform X2

    UniProtKB/TrEMBL
    Q5F3G4

  6. XM_046930183.1 → XP_046786139.1  gem-associated protein 4 isoform X2

    UniProtKB/TrEMBL
    Q5F3G4

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001012610.1: Suppressed sequence

    Description
    NM_001012610.1: This RefSeq was permanently suppressed because currently there is support for the protein but not for the transcript.
Nucleotide Protein Strain
Heading Accession and Version

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