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SLC26A4 solute carrier family 26 member 4 [ Gallus gallus (chicken) ]

Gene ID: 427845, updated on 18-Sep-2024

Summary

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Symbol
SLC26A4provided by CGNC
Full Name
solute carrier family 26 member 4provided by CGNC
Primary source
CGNC:6053
See related
Ensembl:ENSGALG00010009254
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See SLC26A4 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
22
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (14983818..15005850)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (15121235..15143267)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112533028 Neighboring gene dihydrouridine synthase 4 like Neighboring gene uncharacterized LOC121108759 Neighboring gene microRNA 2126 Neighboring gene B-cell receptor associated protein 29 Neighboring gene Cbl proto-oncogene like 1 Neighboring gene solute carrier family 26 member 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables bicarbonate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chloride transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxalate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables secondary active sulfate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pendrin
Names
solute carrier family 26 (anion exchanger), member 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    14983818..15005850
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_425419.8 → XP_425419.3  pendrin isoform X1

    Conserved Domains (1) summary
    TIGR00815
    Location:67 → 724
    sulP; high affinity sulphate transporter 1

  2. XM_025153755.3 → XP_025009523.1  pendrin isoform X2

    UniProtKB/TrEMBL
    A0A8V0Y9J3
    Related
    ENSGALP00010012653.1, ENSGALT00010022063.1
    Conserved Domains (2) summary
    cd07042
    Location:519 → 586
    STAS_SulP_like_sulfate_transporter; Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function
    pfam00916
    Location:2 → 350
    Sulfate_transp; Sulfate permease family

  3. XM_046943779.1 → XP_046799735.1  pendrin isoform X2

    UniProtKB/TrEMBL
    A0A8V0Y9J3

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    15121235..15143267
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040661236.2 → XP_040517170.1  pendrin isoform X1

    Conserved Domains (1) summary
    TIGR00815
    Location:67 → 724
    sulP; high affinity sulphate transporter 1

  2. XM_040661237.2 → XP_040517171.1  pendrin isoform X2

    UniProtKB/TrEMBL
    A0A8V0Y9J3
    Conserved Domains (2) summary
    cd07042
    Location:519 → 586
    STAS_SulP_like_sulfate_transporter; Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function
    pfam00916
    Location:2 → 350
    Sulfate_transp; Sulfate permease family

  3. XM_046908709.1 → XP_046764665.1  pendrin isoform X2

    UniProtKB/TrEMBL
    A0A8V0Y9J3
Nucleotide Protein
Heading Accession and Version

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