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CDK8 cyclin dependent kinase 8 [ Gallus gallus (chicken) ]

Gene ID: 428080, updated on 17-Aug-2024

Summary

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Symbol
CDK8provided by CGNC
Full Name
cyclin dependent kinase 8provided by CGNC
Primary source
CGNC:12849
See related
Ensembl:ENSGALG00010005875
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See CDK8 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (176459722..176528846, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (176539812..176614020, complement)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 12 Neighboring gene WASP family member 3 Neighboring gene ring finger protein 6 Neighboring gene ATPase phospholipid transporting 8A2 Neighboring gene uncharacterized LOC121113404

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II CTD heptapeptide repeat kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cyclin-dependent protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclin-dependent kinase 8
XP_004938840.2
XP_015134480.1
XP_025002615.1
XP_040514364.1
XP_040514365.1
XP_040514366.1
XP_040514367.1
XP_040514368.1
XP_040560121.1
XP_046765183.1
XP_046770403.1
XP_425638.4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    176459722..176528846 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015278994.4 → XP_015134480.1  cyclin-dependent kinase 8 isoform X4

    UniProtKB/TrEMBL
    E1C2T0
    Conserved Domains (1) summary
    cl21453
    Location:1 → 275
    PKc_like; Protein Kinases, catalytic domain

  2. XM_046914447.1 → XP_046770403.1  cyclin-dependent kinase 8 isoform X3

  3. XM_004938783.5 → XP_004938840.2  cyclin-dependent kinase 8 isoform X2

    UniProtKB/TrEMBL
    A0A8V0XNJ2
    Related
    ENSGALP00010008272.1, ENSGALT00010014045.1
    Conserved Domains (1) summary
    cd07868
    Location:3 → 335
    STKc_CDK8; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

  4. XM_425638.8 → XP_425638.4  cyclin-dependent kinase 8 isoform X1

    Conserved Domains (1) summary
    cd07868
    Location:3 → 335
    STKc_CDK8; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

  5. XM_025146847.2 → XP_025002615.1  cyclin-dependent kinase 8 isoform X5

    Conserved Domains (1) summary
    cl21453
    Location:1 → 162
    PKc_like; Protein Kinases, catalytic domain

  6. XM_040704187.2 → XP_040560121.1  cyclin-dependent kinase 8 isoform X6

    Conserved Domains (1) summary
    cd07868
    Location:3 → 335
    STKc_CDK8; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    176539812..176614020 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040658432.2 → XP_040514366.1  cyclin-dependent kinase 8 isoform X7

    Conserved Domains (1) summary
    cd07868
    Location:3 → 335
    STKc_CDK8; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

  2. XM_040658433.2 → XP_040514367.1  cyclin-dependent kinase 8 isoform X4

    Conserved Domains (1) summary
    cl21453
    Location:1 → 275
    PKc_like; Protein Kinases, catalytic domain

  3. XM_046909227.1 → XP_046765183.1  cyclin-dependent kinase 8 isoform X3

  4. XM_040658431.2 → XP_040514365.1  cyclin-dependent kinase 8 isoform X2

    UniProtKB/TrEMBL
    A0A8V0XNJ2
    Conserved Domains (1) summary
    cd07868
    Location:3 → 335
    STKc_CDK8; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

  5. XM_040658430.2 → XP_040514364.1  cyclin-dependent kinase 8 isoform X1

    Conserved Domains (1) summary
    cd07868
    Location:3 → 335
    STKc_CDK8; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

  6. XM_040658434.1 → XP_040514368.1  cyclin-dependent kinase 8 isoform X5

    Conserved Domains (1) summary
    cl21453
    Location:1 → 162
    PKc_like; Protein Kinases, catalytic domain

RNA

  1. XR_005844076.2 RNA Sequence

Nucleotide Protein
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