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ENDOD1 endonuclease domain containing 1 [ Gallus gallus (chicken) ]

Gene ID: 428090, updated on 17-Aug-2024

Summary

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Symbol
ENDOD1provided by CGNC
Full Name
endonuclease domain containing 1provided by CGNC
Primary source
CGNC:12927
See related
Ensembl:ENSGALG00010008395
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See ENDOD1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (185328657..185337390, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (185377774..185386519, complement)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107052369 Neighboring gene sestrin 3 Neighboring gene CWC15 spliceosome associated protein homolog Neighboring gene angiomotin like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endonuclease domain-containing 1 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    185328657..185337390 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_425648.7 → XP_425648.3  endonuclease domain-containing 1 protein

    UniProtKB/TrEMBL
    A0A8V0Y2I3
    Related
    ENSGALP00010011632.1, ENSGALT00010020084.1
    Conserved Domains (1) summary
    smart00892
    Location:67 → 270
    Endonuclease_NS; DNA/RNA non-specific endonuclease

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    185377774..185386519 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040661829.2 → XP_040517763.1  endonuclease domain-containing 1 protein

    UniProtKB/TrEMBL
    A0A8V0Y2I3
    Conserved Domains (1) summary
    smart00892
    Location:67 → 270
    Endonuclease_NS; DNA/RNA non-specific endonuclease
Nucleotide Protein
Heading Accession and Version

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