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EPHA10 EPH receptor A10 [ Gallus gallus (chicken) ]

Gene ID: 428219, updated on 17-Aug-2024

Summary

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Symbol
EPHA10provided by CGNC
Full Name
EPH receptor A10provided by CGNC
Primary source
CGNC:1351
See related
Ensembl:ENSGALG00010013302
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See EPHA10 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
18
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 23 NC_052554.1 (3959718..3993686)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 23 NC_052595.1 (3726257..3760240)

Chromosome 23 - NC_052554.1Genomic Context describing neighboring genes Neighboring gene mannosidase endo-alpha like Neighboring gene yrdC N6-threonylcarbamoyltransferase domain containing Neighboring gene chromosome 23 open reading frame, human C1orf109 Neighboring gene R-spondin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane-ephrin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ephrin type-A receptor 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052554.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    3959718..3993686
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_425778.8 → XP_425778.3  ephrin type-A receptor 10

    UniProtKB/TrEMBL
    A0A8V0YIY8
    Related
    ENSGALP00010018788.1, ENSGALT00010031998.1
    Conserved Domains (4) summary
    cd05064
    Location:621 → 886
    PTKc_EphR_A10; Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10
    cd10487
    Location:33 → 205
    EphR_LBD_A10; Ligand Binding Domain of Ephrin type-A Receptor 10
    cd00063
    Location:445 → 535
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cl15755
    Location:908 → 977
    SAM_superfamily; SAM (Sterile alpha motif )

RNA

  1. XR_005841630.2 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052595.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    3726257..3760240
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040689721.2 → XP_040545655.1  ephrin type-A receptor 10

    UniProtKB/TrEMBL
    A0A8V0YIY8
    Conserved Domains (4) summary
    cd05064
    Location:621 → 886
    PTKc_EphR_A10; Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10
    cd10487
    Location:33 → 205
    EphR_LBD_A10; Ligand Binding Domain of Ephrin type-A Receptor 10
    cd00063
    Location:445 → 535
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cl15755
    Location:908 → 977
    SAM_superfamily; SAM (Sterile alpha motif )

RNA

  1. XR_005855792.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases
Research Materials