U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CG13601 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 42826, updated on 9-Dec-2024

Summary

Go to the top of the page Help
Official Symbol
CG13601provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0039126
Locus tag
Dmel_CG13601
See related
AllianceGenome:FB:FBgn0039126
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG13601
Summary
Predicted to be involved in regulation of lipid metabolic process. Predicted to be active in mitochondrion. Is expressed in adult head and organism. Human ortholog(s) of this gene implicated in 3-methylglutaconic aciduria type 3 and optic atrophy 3. Orthologous to human OPA3 (outer mitochondrial membrane lipid metabolism regulator OPA3). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CG13601 in Genome Data Viewer
Location:
95C13-95C13; 3-81 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (23926372..23927634, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (19752094..19753356, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene six-banded Neighboring gene uncharacterized protein Neighboring gene Nuclear division cycle 1 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Regulatory particle triple-A ATPase 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Gene knockout by inducing P-element transposition in Drosophila. Ou HL. Genet Mol Res, 2013 Jan 4. PMID 23315879
  2. Extensive identification and analysis of conserved small ORFs in animals. Mackowiak SD, et al. Genome Biol, 2015 Sep 14. PMID 26364619, Free PMC Article
  3. A protein complex network of Drosophila melanogaster. Guruharsha KG, et al. Cell, 2011 Oct 28. PMID 22036573, Free PMC Article
  4. Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes. López-Varea A, et al. G3 (Bethesda), 2021 Dec 8. PMID 34599810, Free PMC Article
  5. CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans. Wei P, et al. Genome Res, 2020 Jan. PMID 31722958, Free PMC Article

See all (24) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in regulation of lipid metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in mitochondrion ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein
Names
CG13601-PA
CG13601-PB

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    23926372..23927634 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_142935.2 → NP_651192.1  uncharacterized protein Dmel_CG13601, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_651192.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VCG3
    Related
    FBpp0083908
    Conserved Domains (1) summary
    pfam07047
    Location:9 → 123
    OPA3; Optic atrophy 3 protein (OPA3)

  2. NM_001275961.1 → NP_001262890.1  uncharacterized protein Dmel_CG13601, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001262890.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0B4KGV7
    Conserved Domains (1) summary
    pfam07047
    Location:9 → 123
    OPA3; Optic atrophy 3 protein (OPA3)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A0A0B4KGV7 A0A0B4KGV7
Q9VCG3.1 Q9VCG3

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Chemical Information
Molecular Biology Databases
Research Materials
Tools