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RPL15 ribosomal protein L15 [ Gallus gallus (chicken) ]

Gene ID: 428442, updated on 14-Dec-2024

Summary

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Symbol
RPL15provided by CGNC
Full Name
ribosomal protein L15provided by CGNC
Primary source
CGNC:53365
See related
Ensembl:ENSGALG00010001698
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
L10
Orthologs
human mouse all
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Genomic context

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See RPL15 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
4
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (37093487..37098570)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (37144469..37149579)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene U1 spliceosomal RNA Neighboring gene ubiquitin conjugating enzyme E2 E1 Neighboring gene NFKB inhibitor interacting Ras like 1 Neighboring gene nuclear receptor subfamily 1 group D member 2 Neighboring gene thyroid hormone receptor beta Neighboring gene uncharacterized LOC121109993

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Differential expression of the L10 ribosomal protein during heart development. Kirby ML, et al. Biochem Biophys Res Commun, 1995 Jul 17. PMID 7626060
  2. A comprehensive collection of chicken cDNAs. Boardman PE, et al. Curr Biol, 2002 Nov 19. PMID 12445392
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
large ribosomal subunit protein eL15; 60S ribosomal protein L15
Names
L10 ribosomal protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001305165.1 → NP_001292094.1  large ribosomal subunit protein eL15

    See identical proteins and their annotated locations for NP_001292094.1

    Status: VALIDATED

    Source sequence(s)
    BU136896, BU357024, BU410568, BX279156
    UniProtKB/Swiss-Prot
    P51417
    UniProtKB/TrEMBL
    F1NQG5
    Conserved Domains (1) summary
    pfam00827
    Location:2 → 191
    Ribosomal_L15e; Ribosomal L15

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    37093487..37098570
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015281571.4 → XP_015137057.1  60S ribosomal protein L15 isoform X1

    UniProtKB/Swiss-Prot
    P51417
    UniProtKB/TrEMBL
    F1NQG5
    Conserved Domains (1) summary
    pfam00827
    Location:2 → 191
    Ribosomal_L15e; Ribosomal L15

  2. XM_015281570.4 → XP_015137056.1  60S ribosomal protein L15 isoform X1

    UniProtKB/Swiss-Prot
    P51417
    UniProtKB/TrEMBL
    F1NQG5
    Conserved Domains (1) summary
    pfam00827
    Location:2 → 191
    Ribosomal_L15e; Ribosomal L15

  3. XM_015281569.4 → XP_015137055.1  60S ribosomal protein L15 isoform X1

    UniProtKB/Swiss-Prot
    P51417
    UniProtKB/TrEMBL
    F1NQG5
    Related
    ENSGALP00010002201.1, ENSGALT00010003897.1
    Conserved Domains (1) summary
    pfam00827
    Location:2 → 191
    Ribosomal_L15e; Ribosomal L15

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    37144469..37149579
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046911692.1 → XP_046767648.1  60S ribosomal protein L15 isoform X1

    UniProtKB/Swiss-Prot
    P51417
    UniProtKB/TrEMBL
    F1NQG5

  2. XM_046911691.1 → XP_046767647.1  60S ribosomal protein L15 isoform X1

    UniProtKB/Swiss-Prot
    P51417
    UniProtKB/TrEMBL
    F1NQG5

  3. XM_046911694.1 → XP_046767650.1  60S ribosomal protein L15 isoform X1

    UniProtKB/Swiss-Prot
    P51417
    UniProtKB/TrEMBL
    F1NQG5

  4. XM_046911693.1 → XP_046767649.1  60S ribosomal protein L15 isoform X1

    UniProtKB/Swiss-Prot
    P51417
    UniProtKB/TrEMBL
    F1NQG5

  5. XM_046911690.1 → XP_046767646.1  60S ribosomal protein L15 isoform X1

    UniProtKB/Swiss-Prot
    P51417
    UniProtKB/TrEMBL
    F1NQG5

  6. XM_046911689.1 → XP_046767645.1  60S ribosomal protein L15 isoform X1

    UniProtKB/Swiss-Prot
    P51417
    UniProtKB/TrEMBL
    F1NQG5
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P51417.1 GenPept UniProtKB/Swiss-Prot:P51417

Gene LinkOut

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