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CG18428 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 42857, updated on 9-Dec-2024

Summary

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Official Symbol
CG18428provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0039149
Locus tag
Dmel_CG18428
See related
AllianceGenome:FB:FBgn0039149
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG18428
Summary
Orthologous to human ARL6IP4 (ADP ribosylation factor like GTPase 6 interacting protein 4). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG18428 in Genome Data Viewer
Location:
95E1-95E1; 3-83 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (24109336..24110010)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (19935089..19935732)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4E homologous protein Neighboring gene Syntaxin 1A Neighboring gene transfer RNA:Leucine-TAA 2-1 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Rootletin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. NineTeen Complex-subunit Salsa is required for efficient splicing of a subset of introns and dorsal-ventral patterning. Rathore OS, et al. RNA, 2020 Dec. PMID 32963109, Free PMC Article
  2. Modularity and hormone sensitivity of the Drosophila melanogaster insulin receptor/target of rapamycin interaction proteome. Glatter T, et al. Mol Syst Biol, 2011 Nov 8. PMID 22068330, Free PMC Article
  3. Genome-wide measurement of spatial expression in patterning mutants of Drosophila melanogaster. Combs PA, et al. F1000Res, 2017. PMID 28299188, Free PMC Article
  4. A Cross-Species Study of PI3K Protein-Protein Interactions Reveals the Direct Interaction of P85 and SHP2. Breitkopf SB, et al. Sci Rep, 2016 Feb 3. PMID 26839216, Free PMC Article
  5. Ultra-deep sequencing of ribosome-associated poly-adenylated RNA in early Drosophila embryos reveals hundreds of conserved translated sORFs. Li H, et al. DNA Res, 2016 Dec. PMID 27559081, Free PMC Article

See all (30) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein
Names
CG18428-PA
CG18428-PC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    24109336..24110010
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001300567.2 → NP_001287496.1  uncharacterized protein Dmel_CG18428, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001287496.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q4V5H0
    Conserved Domains (1) summary
    pfam10500
    Location:8 → 70
    SR-25; Nuclear RNA-splicing-associated protein

  2. NM_142956.3 → NP_651213.1  uncharacterized protein Dmel_CG18428, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_651213.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    C9QP01, Q9VCD4
    Related
    FBpp0083928
    Conserved Domains (1) summary
    pfam10500
    Location:74 → 136
    SR-25; Nuclear RNA-splicing-associated protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q4V5H0 Q4V5H0
Q9VCD4 Q9VCD4

Gene LinkOut

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