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TRAPPC11 trafficking protein particle complex 11 [ Gallus gallus (chicken) ]

Gene ID: 428748, updated on 17-Aug-2024

Summary

Official Symbol
TRAPPC11provided by CGNC
Official Full Name
trafficking protein particle complex 11provided by CGNC
Primary source
CGNC:53450
See related
Ensembl:ENSGALG00010007294
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
GRY; FOIGR; LGMD2S; C4orf41; C4H4ORF41
Orthologs
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Genomic context

See TRAPPC11 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
29
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (39325564..39350441, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (39273396..39298273, complement)

Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase 6 Neighboring gene storkhead box 2 Neighboring gene RWD domain containing 4 Neighboring gene uncharacterized LOC107051753

Genomic regions, transcripts, and products

General protein information

Preferred Names
trafficking protein particle complex subunit 11
Names
UPF0636 protein C4orf41
foie gras homolog
gryzun homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001031536.2NP_001026707.1  trafficking protein particle complex subunit 11

    See identical proteins and their annotated locations for NP_001026707.1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000073
    UniProtKB/Swiss-Prot
    Q5ZI89
    UniProtKB/TrEMBL
    A0A8V0XX88
    Related
    ENSGALP00010009634.1, ENSGALT00010017425.1
    Conserved Domains (3) summary
    pfam07919
    Location:9821085
    Gryzun; Gryzun, putative trafficking through Golgi
    pfam11817
    Location:263522
    Foie-gras_1; Foie gras liver health family 1
    pfam12742
    Location:10411094
    Gryzun-like; Gryzun, putative Golgi trafficking

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    39325564..39350441 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_005859137.2 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    39273396..39298273 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_006934386.1 RNA Sequence